| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0988 |
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| Symbol | |
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| ID | 6281090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1109604 |
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| End bp | 1111277 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642620548 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001894631 |
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| Protein GI | 187922989 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATACA ACCGTCGTTC GAAGAACATC ACGCAGGGCG TGGCGCGCTC GCCGAATCGA
TCGATGTACT ACGCGCTCGG CTACGAAAAA GCCGACTTCG ACAAGCCGAT GATCGGCATC
GCCAACGGCC ACTCGACCAT CACGCCGTGC AACGCCGGCC TGCAGCGTCT GGCCGATGCC
GCCGTCGCCG CGATCAAGGG CGCCGACGCG AATCCGCAGA TCTTCGGCAC GCCGACCATC
TCGGACGGCA TGTCGATGGG CACCGAAGGC ATGAAGTACT CGCTGGTATC GCGCGAAGTC
ATCTCCGACT GCATCGAGAC CTGCGTGCAA GGCCAGTGGA TGGACGGCGT GGTCGTGATC
GGCGGCTGCG ACAAGAACAT GCCAGGCGGC ATGATCGGCA TGCTGCGCAC CAATGTGCCG
AGCATCTACG TGTACGGCGG CACGATCCGT CCGGGCAACT GGAAGGGCAC CGACCTGACC
ATTGTGTCGT CGTTCGAAGC TGTCGGCGAG TTCACGGCCG GCCGCATGTC GCAGGAGGAT
TTCGACGGGA TCGAACAGAA CGCGTGCCCC TCGACGGGTT CGTGCGGCGG CATGTACACC
GCCAACACCA TGAGTTCGTC GTTCGAGGCG CTCGGCATGT CGCTGCTGTA TTCGTCGACG
ATGGCCAATC CGGATCAGGA AAAGGTCGAC TCGGCGGCCG AATCGGCCCG CGTGCTGGTC
GAATCGGTCA AGAAGGATCT GAAGCCGCGC GACATCGTCA CGAAGAAGTC GATCGAAAAC
GCCGTGGCCG TGATCATGGC CACCGGCGGC TCGACCAATG CCGTGCTGCA CTTCCTCGCG
ATCGCGCACG CGGCCGAAGT GGAATGGAGC ATCGACGACT TCGAGCGTAT GCGCAAGAAG
GTGCCGGTGA TCTGCAACCT GAAGCCGTCG GGCCAGTTCG TGGCGACCGA TCTGCACAAG
GCCGGCGGTA TTCCGCAAGT CATGAAGATC CTGCTCGACG CCGGCCTGCT GCATGGCGAT
TGCATCACGA TCACCGGCAG GACCATCGCC GAAGAACTGA AGGACGTGCC GGGCAAGCCG
CGCGCCGATC AGCAAGTGAT TTTCCCGATC GACCAGGCGC TCTACAAGGA AGGCCACCTG
GCGATCCTGA AGGGCAATCT GGCCGTCGAT GGCGCGGTCG CCAAGATCAC CGGTCTGAAG
AACCCGGTCA TCACCGGCCC AGCCCGCGTG TTCGACGACG AGCAAAGCGC GCTTGAAGCG
ATTCTGGCCG ACAAGATCGT GGCCGGCGAC GTGGTGGTGC TGCGCTACCT CGGCCCGAAG
GGCGGCCCCG GCATGCCGGA GATGCTCGCG CCGACTTCGG CGATCATCGG CAAGGGTCTT
GGCGAAAGCG TCGGCCTGAT CACCGACGGG CGCTTCTCGG GCGGCACGTG GGGCATGGTG
GTCGGTCACG TCGCGCCGGA GGCCTTCGTG GGTGGCACGA TCGCGTTCGT GCAGGAAGGC
GACTCGATCA CCATCGACGC GCACAAGCTG CTGCTGCAAC TGAATATCGA CAATGCCGAA
CTGGAGCGCC GCCGCGCCGC ATGGCAACAG CCGAAGCCGC GTTACACGCG TGGCGTGATG
GCGAAATACT TTGCCTTGGC GCAACCGGCC AACAAAGGGG CGATAACGGG CTAA
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| Protein sequence | MAYNRRSKNI TQGVARSPNR SMYYALGYEK ADFDKPMIGI ANGHSTITPC NAGLQRLADA
AVAAIKGADA NPQIFGTPTI SDGMSMGTEG MKYSLVSREV ISDCIETCVQ GQWMDGVVVI
GGCDKNMPGG MIGMLRTNVP SIYVYGGTIR PGNWKGTDLT IVSSFEAVGE FTAGRMSQED
FDGIEQNACP STGSCGGMYT ANTMSSSFEA LGMSLLYSST MANPDQEKVD SAAESARVLV
ESVKKDLKPR DIVTKKSIEN AVAVIMATGG STNAVLHFLA IAHAAEVEWS IDDFERMRKK
VPVICNLKPS GQFVATDLHK AGGIPQVMKI LLDAGLLHGD CITITGRTIA EELKDVPGKP
RADQQVIFPI DQALYKEGHL AILKGNLAVD GAVAKITGLK NPVITGPARV FDDEQSALEA
ILADKIVAGD VVVLRYLGPK GGPGMPEMLA PTSAIIGKGL GESVGLITDG RFSGGTWGMV
VGHVAPEAFV GGTIAFVQEG DSITIDAHKL LLQLNIDNAE LERRRAAWQQ PKPRYTRGVM
AKYFALAQPA NKGAITG
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