Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0896 |
Symbol | |
ID | 6281368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1002924 |
End bp | 1003664 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642620457 |
Product | short chain dehydrogenase |
Protein accession | YP_001894540 |
Protein GI | 187922898 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA TTCTTATCGT CGGCGCCACG TCGGCGATCG CCATCGCCTG TGCACGCCAA TGGGCCACGC AAGGCGCACG TTTTTTCCTG GTTGCCCGCA ACGGCGAACG CCTTCAGCAG GTGGCTGCGG ATCTGAGCGC GCGTGGCGCG CAACTGGCAG CTTGTCATCA ACTCGATATT GATCGCCTGG ATCTGCATGC GGGCATGCTC GAACAGTGCC AGAAAGAACT CGGCGCGCTC GACATCGTGC TGGTCGCGCC CGGCACCCTG CCGGACCAGG CCGCGTGCCA GGCGGACCCC GCGGTGGCCG TGCGTGAATT CAATACGAAC GCCGTTTCTG TTATCGCCCT GCTGACGCCG ATTGCCAACA TCCTGGAAGC GCAAAAGCGC GGTGCGCTGG CGGTCATCTC GTCGGTGGCG GGCGATCGCG GCCGGCCTTC GAACTATCTG TACGGCAGCG CGAAGGCCGC GCTTTCCGCA TTCTGCGAGG GGCTGAATGC ACGGCTATTC AAAACCGGCG TCCACGTTCT GACCATCAAG CCGGGCTTCG TGGCGACGCC GATGACAGCC GGTTTGCCGT TGCCCGGCCC GCTCGTCGCG ACGCCCGATC AGGTGGCGAG CGATATCGTG CGCGCCGTCG ACAAGCGCAA GGACGTGCTG TATACGCGCT GGTTCTGGGC GATCATCATG CTGATCATCC GCTCGGTGCC ACGCTTCCTG TTCAAGCGCG CGTCCCTGTG A
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Protein sequence | MKNILIVGAT SAIAIACARQ WATQGARFFL VARNGERLQQ VAADLSARGA QLAACHQLDI DRLDLHAGML EQCQKELGAL DIVLVAPGTL PDQAACQADP AVAVREFNTN AVSVIALLTP IANILEAQKR GALAVISSVA GDRGRPSNYL YGSAKAALSA FCEGLNARLF KTGVHVLTIK PGFVATPMTA GLPLPGPLVA TPDQVASDIV RAVDKRKDVL YTRWFWAIIM LIIRSVPRFL FKRASL
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