Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0883 |
Symbol | |
ID | 6282241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 981743 |
End bp | 983914 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642620444 |
Product | glycosyl transferase family 2 |
Protein accession | YP_001894527 |
Protein GI | 187922885 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAA AATTTGATGG GCATCAACAG GAAGCAGTCA GTCAGGACGT GTCCCGGGAT GAGCCGTTGT CGTCTGGCGC CGAGGATGCA CACCGTCTTC AGGCGCGCGT GACACAGCTC GAGAAACAGC TCACCGACGC GCTCACCGAC GGCGAGTCGA TCGCCAAGCT CAACAATCGG CTTCTGAAGC TGGAAGTCGA GCACGCCGCT TTGCTCCGTT CGACTTCGTG GCGTGTGACG GCACCGCTGC GTTCGGTGAG CCGTATCGCC GCGGCGGTCC GGCTCGCGTT CAGCACCATT GGCCGCCAGG CCGAGGTCAG GGGCGGGCTG GGCAGCGCGC TGGGCTATTA CGCGTCGGTG ATCGGGCGCG AAGGTCTGCC GGGCGTCGTG GCGCGCGTGC GCCGGCTCAA AAGCGGACGC GGATTCGCCG ACGGTCCGCC GCGTGACGAG GTCTACCACG AGTGGATCAG CCAGTACGAT ACGGTCACGC CGGCCAAGCA ACGCGAAATC GAAGCGGAAA TCGGCCTGCT GGCGCGCAAG CCGCTGATCT CCGTCGTCGT GCCCACGTTC AATAGCGACG AGCGTCTGCT GCGCGAAATG GTGGCATCGG TGCAGGCGCA GATCTATCCG CACTGGGAGC TGTGCATCGC GGACGATGCG TCGACCCAGC CGCACGTCAA AGCTGTCCTG GAGGAGGTCG CCGCGGCCGA CAGCCGCATC AAGGTCGTCT TCCGTGAGAC GAACGGGCAC ATTTCCGAAG CCAGCAATAG CGCGCTCGCG CTTGCAACGG GCGAATATGT CGCCTTGCTG GATCACGACG ACCTGCTGCC GCCGCACGCG CTGTATATGG TGGCGCGCTA CATCAATCTG CATCCGCATG GCCGGATGTT CTACAGCGAC GAAGACAAGC TCACCACCGA GGGCAAGCGC ACCACGCCTT ACTTCAAGTG CGACTGGAAC CCGCAGATGT TCCTCACGCA GAACATGTTC TCCCATCTGG GCGTGTTCGA GACGAAGCTG GTTCGGGACG CGGGCGGTTT CAGGAAGGGC TTTGAAGGCA GCCAGGATTA CGACCTGGCA TTGCGTTGCG TGGAACTCGC CGGCGACGAC AGCGTGATCC ACATTCCGCA TGTGCTGTAT CACTGGCGCA TCGTGCCCGG CAGCACGGCA GGCAGCGGCA GCGAAAAGCC GTATGCGCTG GTCGCCGCGA TTCGCGCGCT GGAAGATCAC CTGGAGCGCG CGAACATCAG CGCGACGGTC GAGCATCCGG TGGAATCGCT CGGGGTGCTA CGCGTGCGTT ATACGCTGCC GAGTCCGCAA CCCAAAGTGT CGATCATCAT TCCGACGCGC GATGGGCTTG CGCTGCTCAA GCAATGTGTG GACAGTGTTT TTGCCTACAC GCTTTATCAG AATTTCGAAA TCATCATCGT CGACAACGGC AGCGTGAAGC CGGAGACAAT GAAATATTTC GACGAAGTGT CACAGCGTCC CAATGTCCGT GTATTGCGCG ATGAATCGCC ATTCAATTTC TCGGCGCTGA ATAATCACGC GGCGCGCGTG GCGACCGGTG AATTCCTGTG TCTCCTGAAT AACGATATCG AGGTGATCTC GCCGGACTGG CTGAATGAAA TGGTCAGTCT GGCCAATCTG CCGCGCGCCG GCGCGGTGGG CGCGTGCCTG TGGTATCCGA CTGATGCATT GCAGCACGGC GGCGTGGTGC TCGGGCTCGG CGGGATTGCC GGCCACATGC ATCACATGAT GAAGCGCGGG CACTTCGGGT ACTTCGGCCG CGCGGTGGCT ACGCAGAATC TGTCGGCGGT GACGGCCGCT TGCCTCGTGG TCAAGAAGTC GGTCTACGAC GAAGTGGGCG GACTGGAAGA AGACCTGGCC GTCGCCTTCA ACGACGTGGA CTTCTGCATG AAGCTGCTGA AGGCGGGCTA CCGCAATATC TGGACGCCGT ATGCCGAGAT GTACCATCAC GAATCGGCGA CTCGCGGCTC GGACCTCGAT CCGGACAAGT ACGAGCGGTT CGTGAGCGAA ATCCGCCGTA TGGAGGCACG TTGGGAAGGC TGGTTCGAAC GCGATCCGGC GTACAACCCC AATCTGTCGC TCAGTTGCGA GGTGCTGCCG TTTACGCTGG CGTCGCCGCC GCGCATCGGC CAGTTCGAAT AG
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Protein sequence | MNTKFDGHQQ EAVSQDVSRD EPLSSGAEDA HRLQARVTQL EKQLTDALTD GESIAKLNNR LLKLEVEHAA LLRSTSWRVT APLRSVSRIA AAVRLAFSTI GRQAEVRGGL GSALGYYASV IGREGLPGVV ARVRRLKSGR GFADGPPRDE VYHEWISQYD TVTPAKQREI EAEIGLLARK PLISVVVPTF NSDERLLREM VASVQAQIYP HWELCIADDA STQPHVKAVL EEVAAADSRI KVVFRETNGH ISEASNSALA LATGEYVALL DHDDLLPPHA LYMVARYINL HPHGRMFYSD EDKLTTEGKR TTPYFKCDWN PQMFLTQNMF SHLGVFETKL VRDAGGFRKG FEGSQDYDLA LRCVELAGDD SVIHIPHVLY HWRIVPGSTA GSGSEKPYAL VAAIRALEDH LERANISATV EHPVESLGVL RVRYTLPSPQ PKVSIIIPTR DGLALLKQCV DSVFAYTLYQ NFEIIIVDNG SVKPETMKYF DEVSQRPNVR VLRDESPFNF SALNNHAARV ATGEFLCLLN NDIEVISPDW LNEMVSLANL PRAGAVGACL WYPTDALQHG GVVLGLGGIA GHMHHMMKRG HFGYFGRAVA TQNLSAVTAA CLVVKKSVYD EVGGLEEDLA VAFNDVDFCM KLLKAGYRNI WTPYAEMYHH ESATRGSDLD PDKYERFVSE IRRMEARWEG WFERDPAYNP NLSLSCEVLP FTLASPPRIG QFE
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