| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0860 |
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| Symbol | |
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| ID | 6282910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 958551 |
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| End bp | 959798 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642620422 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001894505 |
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| Protein GI | 187922863 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0321479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.15183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA CACTCATGTC GGCTGCAATT GTCGCATCGA CCCTCGCCAC GAGCGCACAG
GTGGCAAGTG CTGCCGAGTC ACTTTCTGTA TTGCACTGGT GGACCTCGGG CGGGGAATCG
AAGGCGATCA GAGTGCTTAA GGACGACATG GATAAACAGG GTTACGAGTG GAAAGACTTC
GCCGTAGCCG GAGGAGCCGG TGCGGCCGCC ATGACGGCGT TGAAGACCCA GGTCATGTCC
GGCAACGCAC CGTCGGCTGC GCAGATCAAG GGGCCGTTGA TACAGGACTG GGCTGATCAA
GGCGTGCTGG TCGATATCGA CAAGTCCGCG ACCGACTGGA AAGCCCAACT TCCGGCGCAG
ATCAACAAGA CGATGATGTC AAAAGGCCAC TACGTGGCCG CGCCGTTTTC GGTGCACCGA
ATCAACTGGC TGTGGATCAA CAAGGCCGCC CTCGATAAAG TGGGCGGCAA GCCGCCGACC
ACATGGCCCG AGTTCTTCGC GCTCGCCGAC AAGTTCCGGG CTGCGGGCAT TACGCCCGTC
GCGCGTGGTG GCCAGCCTTG GCAAGACATG ACCATCTGGG AGACAGTCGT GCTATCTCAG
GGCGCGGATT TCTATCGCAA GGCCATGATC GACCTCGATC AGAAAACACT CACTTCGCCG
CAGATGTTGC AGGTGTTCCA GACTGCCCGG AAGATTCAGG GTTACTTCGA CAAAGGCTCG
ACTGGTCGCG ACTGGAATCT CGCGACAGCG ATGGTCATCA ACGGATCGGG TGGGATGCAA
TTCATGGGGG ACTGGGCAAA AGGTGAATTC GCGAATGCGA ACAAGAAAGC CGACGTCGAC
TATATTTGCG CGGCTGCGCC TGGTACGTCG AATGCCTTCA CCTACACTGT AGACTCGTTC
GTGTTTTTCC AGCAGAACGG CAAAAAAGAA GCGACGCTCG GACAGCTTGC GTTGGCAAAG
ACAATCATGT CGCCCGCTTT CCAGGAACAA TTCAGTCTGT ACAAGGGTTC GATTCCGGTC
AGGCAGGATG TTTCAATGGA CAAGTTCGAC GCCTGCGCCA AGAAGTCATA CGCAGATGAG
CAAACCACTA TTAAATCCAA CACGTTCTTT CCGTCGTTCG CGTTCGGCGA CGTTCAGTCG
TCAGCCACCG AAGGCGCGAT TACCGATGTC GTGACCGGCT TCATGAACTC GAATGAAGAC
CCGCAAGAGG CAATGCGCAA GGTCGCCGCT GCAGCGAAGG TCAAATAG
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| Protein sequence | MKRTLMSAAI VASTLATSAQ VASAAESLSV LHWWTSGGES KAIRVLKDDM DKQGYEWKDF
AVAGGAGAAA MTALKTQVMS GNAPSAAQIK GPLIQDWADQ GVLVDIDKSA TDWKAQLPAQ
INKTMMSKGH YVAAPFSVHR INWLWINKAA LDKVGGKPPT TWPEFFALAD KFRAAGITPV
ARGGQPWQDM TIWETVVLSQ GADFYRKAMI DLDQKTLTSP QMLQVFQTAR KIQGYFDKGS
TGRDWNLATA MVINGSGGMQ FMGDWAKGEF ANANKKADVD YICAAAPGTS NAFTYTVDSF
VFFQQNGKKE ATLGQLALAK TIMSPAFQEQ FSLYKGSIPV RQDVSMDKFD ACAKKSYADE
QTTIKSNTFF PSFAFGDVQS SATEGAITDV VTGFMNSNED PQEAMRKVAA AAKVK
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