| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0823 |
|---|
| Symbol | |
|---|
| ID | 6282320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 913484 |
|---|
| End bp | 914626 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642620386 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001894469 |
|---|
| Protein GI | 187922827 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGT CAGTCACGAT CTTCCACAAC GTCGTGTGGT CGCGCCACAA GGGTGTCGTG
TTTTCCGCCT TGCATAACAT TTCGGCATCC GGAGCGATTC GCTATTCGAT GGTGCAGATC
GCCGACACCG AGCACGACCG CGTCGGCTTT TCCGACGTCG ATTATTCGTT TCACCGCTAT
CCGATGCAAA AGCTGTTCGA TGGCTGCTAC GAAGACGTGC CGACCATGAA GCTGATCGCG
CGGCTCACGT GGGAAGTGTT GCGCACCAAG TCTGATCTGA TCGTGCTGCC GGGCTATCAC
CGGCCGGAAT ACTGGGCGAT GCTCGCGGCG TGCATCGTGA CCGGTAAACG GCGCGCGGTG
TTCTGCGATT CAACCGCGCG CGATCGGCCC AAAAAGTTGC TGACGTCGAT TCCGAAGCGC
GTGTTTTTCT CCTTGTGCGA CGGCTATTTC GGTTTCGGCG AGCGCAGCCG CGAGTATCTG
CTATCGCTCG GCGCGAAGCG CGACAAGATT TTCGTGCCGT GTCAGGCCGC GGCGATGCCC
GGTTCGTTTT CGCCGGAACG TGCGCTGGTC GAGCGGGTTG CCGGTCGCGC GGGTAATCCG
CCGGTGTTTC TGTTCGTGGG ACGTTTGTCC GAAGAGAAGG GCATCGGCAC GCTGATCGAC
GCGTTCGCCG GATTGCGGCG GCGTATTCCG GCGGCGAAGC TGCGCATTGT CGGCACCGGC
CCGATGTGCG ACGCGTTGCA TGCGAAGGTG GCCGAGCTCG AACTCGGCGA CGCAGTGACA
TTCGTCGGCA GTCTGCAGGA CGAACCGCTG ACGCGCGAGT ATTACGGCGC CACCTGCATG
GTGCTGCCGA GTTACAGCGA ACCGTGGGGA CTTGTGGTCA ACGAGGCGCT CGCGCATGGT
TGCCCGGCCG TGGTCAGCGA AAGTTGCGGC TGTGTGCCGG AACTGGTGAT CGACGGGGTG
AGCGGCTATG CGTTTACGGC GGGCGATGTC GCCGGCCTGC AGCGCACCAT GCTCAAGGCC
ATGGAGGCGT TCGCCGATGC GGGCGGCACC GCGCGCCGCT GCATGGATGT GATTCGCCGT
TTCGATCCGC CATCCGCGGC CGCCAATATT GCTCGCGGCT GTGCATTGAT GTTGAGCGAC
TGA
|
|---|
| Protein sequence | MTASVTIFHN VVWSRHKGVV FSALHNISAS GAIRYSMVQI ADTEHDRVGF SDVDYSFHRY
PMQKLFDGCY EDVPTMKLIA RLTWEVLRTK SDLIVLPGYH RPEYWAMLAA CIVTGKRRAV
FCDSTARDRP KKLLTSIPKR VFFSLCDGYF GFGERSREYL LSLGAKRDKI FVPCQAAAMP
GSFSPERALV ERVAGRAGNP PVFLFVGRLS EEKGIGTLID AFAGLRRRIP AAKLRIVGTG
PMCDALHAKV AELELGDAVT FVGSLQDEPL TREYYGATCM VLPSYSEPWG LVVNEALAHG
CPAVVSESCG CVPELVIDGV SGYAFTAGDV AGLQRTMLKA MEAFADAGGT ARRCMDVIRR
FDPPSAAANI ARGCALMLSD
|
|---|
| |