| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0763 |
|---|
| Symbol | |
|---|
| ID | 6284269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 843456 |
|---|
| End bp | 843935 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642620327 |
|---|
| Product | tol-pal system-associated acyl-CoA thioesterase |
|---|
| Protein accession | YP_001894410 |
|---|
| Protein GI | 187922768 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.21776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.179555 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCA TGAATATGTC GACCAGCCAG CCCGGCGCGG AAATCGGCTA CACGTGGCCA
ATCCGCGTGT ACTACGAAGA TACCGACGCC GGCGGCATCG TGTTTTACGC GAACTACCTG
AAGTTTTTCG AACGTGCGCG CACCGAATGG CTGCGCGCGT GCGGCGTCGA CCAGAATCGG
CTGGCGGACG AAGCAGGCGC GATTTTCATC GTCCGCAGCA CCGCGGTCGA TTATCGGGCG
CCGGCCCGGC TCGACGATGT AGTGAACGTG GTCAGCCGGA TCGAACGGCT CGGTAGAGCC
TCGGTCGATT TCGCACAAGA GGCGTGGCGG GACGGCACGC TGCTTGCTAC CGGTTCCATC
CGGGTCGGCT GCGTGGACCG CATTGCGCTG CGGCCGGCCG CGATTCCTCC GCCGGTTCTC
GACGCCTTGC GGCGCGGCCC GAACGTGAAC GAGCCCCGCG TGTCAACGGA CAACGAATGA
|
|---|
| Protein sequence | MRRMNMSTSQ PGAEIGYTWP IRVYYEDTDA GGIVFYANYL KFFERARTEW LRACGVDQNR
LADEAGAIFI VRSTAVDYRA PARLDDVVNV VSRIERLGRA SVDFAQEAWR DGTLLATGSI
RVGCVDRIAL RPAAIPPPVL DALRRGPNVN EPRVSTDNE
|
|---|
| |