| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0762 |
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| Symbol | |
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| ID | 6284268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 842623 |
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| End bp | 843300 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620326 |
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| Product | protein TolQ |
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| Protein accession | YP_001894409 |
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| Protein GI | 187922767 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.167492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.258035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACACTA CACAAGATCT GTCGATCGTT TCACTCGTAC TCAACGCAAG CCTGCTGGCG
CAGGCTGTCA TGGCCCTGCT GCTGCTGTTG TCGCTGCTGT CGTGGACTTT CATTTTCCGC
AAGTGGTTTG CGATCCGCCG GGCGCGCGCG CAAACTGAGC GTTTCGAACG CGATTTCTGG
TCGGGTGGCG ACCTGCAGGC GCTGTATCAG AGCGCCGCGA ACAACCGTCA CACGATCGGC
GCACTGGAAC GGATTTTCGA GTCCGGCATG CGCGAATTCC TGAAAGGCAA GGAAAAGCGT
CTGAACGATT CGGGCGCGAT TCTCGACGGC GCACGGCGCG CCATGCGTGC CGCGTTCCAG
CGTGAAATGG ACGTGCTCGA AGCCAACCTG GCGTTTCTCG CGTCTGTCGG CTCCGTCAGT
CCATATATCG GTCTGTTCGG CACGGTGTGG GGGATCATGA ATGCGTTCCG CGGCCTCGCC
AACGTGCAGC AGGCCACGCT GGCCAACGTC GCGCCGGGTA TTGCCGAAGC GCTGACCGCC
ACCGCCATCG GTCTGTTCGC CGCGATTCCG GCCGTGGTTG CCTACAACCG CTACGCGCAC
GACATCGACC GCCTGGCCAT CCGCTTCGAG ACTTTCATCG AAGAATTCTC GAACATCCTG
CAGCGTCAGG CACAGTAA
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| Protein sequence | MNTTQDLSIV SLVLNASLLA QAVMALLLLL SLLSWTFIFR KWFAIRRARA QTERFERDFW
SGGDLQALYQ SAANNRHTIG ALERIFESGM REFLKGKEKR LNDSGAILDG ARRAMRAAFQ
REMDVLEANL AFLASVGSVS PYIGLFGTVW GIMNAFRGLA NVQQATLANV APGIAEALTA
TAIGLFAAIP AVVAYNRYAH DIDRLAIRFE TFIEEFSNIL QRQAQ
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