Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0755 |
Symbol | |
ID | 6284467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 835707 |
End bp | 836924 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642620319 |
Product | porin Gram-negative type |
Protein accession | YP_001894403 |
Protein GI | 187922761 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.541984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGAA TAAAACACGT GAAAATTACC CTGACCAGCA CCGCAGTGCT GGCAGCCGCT CCTGCTTTCG CGCAAAGCAG CGTTACGTTG TACGGAATCG TTGATGCAGG TATCGGATAC TTGAGCAGTT CGACGCCAAA AGGCGCGACC GGCGGAAAAT CGTCAATTAC TATGAACAGC GGCATGTGGT CGGGCAGCCG GTTCGGGCTG AAAGGCAGCG AAGATCTGGG CGATGGCACG AGGGCCATCT TCGTACTGGA AGAAGGCTTC AGCAGCGCAA CCGGCGCCCA GTCTGTGTCC GGGTTGGCGT TCAATCGCCA GGCATTTGTG GGCGTGGAAA ATAAAAGCTA CGGCACGTTC ACAGGGGGGC GCCAGTACAC GTCTTATTAT CAGCTTCTGT CACCCTACAG TCCGACCAAA TGGCTGACCG GCGCATACGG TGCCCACCCC GGTGATATCG ACTCGCTCGA TACGAGCTAT CGTGTCAGCA ACGAACTCAA GTATACGTCG CCGGTCTTCA ATGGCCTGAC GCTGGGCGGC TCCTACGCGC TGAGTGGTAC TCCGGGATCG CTGTACAGCG GCTCGACATG GAGCGTGGCG GCCCAGTACA CCAATGGACC AATCGGCATT GCTACAGGCT TCATGCGGGT CAATAACGCG ACAACGAACG GTGGTCCCTG GGGCTCCAAC TCGACCCTGT CGAATAACGG CTCCCAACCC GCCGTCTCGG CAATCAATAC CGGCTACCAG ACGGCGAGAG CACAGCAGCG CTTTGCGGTG ACGGCGGGAT ATAACATCAA CCCGCAATGG GACATTACTG CCTCGTACTC CAACGTGCAG TATGTTCCCG GCACAGGTTC CGCATTCCGC GACACGGCGA TCTTCAATAC AGGTGGCGCG GTGGTGCACT GGAGGCCACT TACGGCACTG GACCTGGCCG CAGGCTATAG CTACACGCGT GCGACGAAGG CGAACCGCAT CTCCAGTCCT GCAAGCTATT CGCAGTTCAA TCTCGTGCAG TACTACAGCC TGTCCAAGCG GACAGGCCTG TATGCCGCGG AGGCCTATCA GCGCGCCGGG GGCCAGACGC TCCTGGCGAG CGCCACGAGC ACCAGCATCG TCAACGCCAC CGCGTCGATC GGTGATGGCC AAAACAGCAC GCCGTCGTCC TCGCGCAGCC AGGTTGGTAT CGGCGTCGGC ATGATCACCC GCTTCTAG
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Protein sequence | MKRIKHVKIT LTSTAVLAAA PAFAQSSVTL YGIVDAGIGY LSSSTPKGAT GGKSSITMNS GMWSGSRFGL KGSEDLGDGT RAIFVLEEGF SSATGAQSVS GLAFNRQAFV GVENKSYGTF TGGRQYTSYY QLLSPYSPTK WLTGAYGAHP GDIDSLDTSY RVSNELKYTS PVFNGLTLGG SYALSGTPGS LYSGSTWSVA AQYTNGPIGI ATGFMRVNNA TTNGGPWGSN STLSNNGSQP AVSAINTGYQ TARAQQRFAV TAGYNINPQW DITASYSNVQ YVPGTGSAFR DTAIFNTGGA VVHWRPLTAL DLAAGYSYTR ATKANRISSP ASYSQFNLVQ YYSLSKRTGL YAAEAYQRAG GQTLLASATS TSIVNATASI GDGQNSTPSS SRSQVGIGVG MITRF
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