Gene Bphyt_0651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0651 
Symbol 
ID6283525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp712028 
End bp712672 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID642620216 
ProductSterol-binding domain protein 
Protein accessionYP_001894300 
Protein GI187922658 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.934133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG CCGCCAAGCC CTTCGCTGCT GCTGTCAATC ATCTGCTCGC CCGCGAATCG 
TGGGCTCGTG AGCGCCTCGC CCCCTACGCG GGCAAGACCG CGAGACTGTC CTGTCCGCCG
GTCGTGCTGA TGCTGCTGGT GCAACCGGAC GGCTATCTGA GCGCGGTCGC CGCCACCGAG
GCGCAGCAGT TCGACGTGAC CATTTCCGTG CCGTCCGACG CGCTGCCCGC CTTCGTACAA
GGCGGCCAGG CGGCGGTGAT GAAGCATGTG AAGATCGAAG GCGATGCCGA ATTCGCCACC
GTGATCGCCA GGCTCGCCGA ACATCTGCGC TGGGAGCCGG AAGAAGACCT GGCCAAATTC
ATCGGCGACG GCCCGGCCTA TAGGGTGGCG TCGGTCGTAC GCACGGTTGG CGAACATGTG
CAGCGGACCG GCCGCAATCT GCTCGACACC GCCGCCGAAT ATCTGCTCGA CGAGAATCCG
CAACTGGTGC GCCGTGCCGC GCTGGAAGAC TTCAACGTCG AACTGGCTCG CGCGCGCGAC
GCATTGGCGC GCGTGGAAAA GCGCCTTGAG CGTCTTGAAC AGAAGGTCGA AGCCCGCGGC
GCTCATGCGT CGGGCGGCGC CGCCACGTCG CGCGGCACGC GCTAG
 
Protein sequence
MTLAAKPFAA AVNHLLARES WARERLAPYA GKTARLSCPP VVLMLLVQPD GYLSAVAATE 
AQQFDVTISV PSDALPAFVQ GGQAAVMKHV KIEGDAEFAT VIARLAEHLR WEPEEDLAKF
IGDGPAYRVA SVVRTVGEHV QRTGRNLLDT AAEYLLDENP QLVRRAALED FNVELARARD
ALARVEKRLE RLEQKVEARG AHASGGAATS RGTR