Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0633 |
Symbol | |
ID | 6282595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 687203 |
End bp | 691645 |
Gene Length | 4443 bp |
Protein Length | 1480 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642620198 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001894282 |
Protein GI | 187922640 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.461456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.141694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGTG TGCTTGCACG CATCTCGCTG TGTCTGTTCG CATGGCTCTC ATTGGTCGCC GCGCAAACAA CAGCCGTTGC CCAATCGTTC GACAATCGCT CGAACACTCA GGTTGTCGCC AATTTTCCCG CGAAACTGAC CGTCGGCGTT CTCGCTAACA GCTGGCTGCC GTTCGACGCC CTGCAAGACG GCCAACTCAC CGGTATGAGC GTCGACTATC TGCGCGCCCT TGTCGGGCCG AACGTGGTGA TCGAAGCCAA GGCGTTTCCG GACCTGCCGC AATTGCTTGC CGCCGCTTGC GCCGGACAGG TCGATCTGCT GACGAGCCTT GCCCGCACCC CCGAGCGCGA GCGGTGCCTG AGTTTTACCG CGCCTTATTT CCGCTCTTCC TCGTCGGTCG TGGTGCGCCG GGACAGTAAC AGTTATGGCA ATCCCGCCCA GTTGGCGGGA GCGCGCATCG CGCTAGAAAA AGGTTTTGCG ATCGAGCGTG TGACACGGGA GCGCTTCCCG CACGCCCAGA TCACCACGTT TGCCGCGACG CGCGACGCAC TCGCCGCCGT GATCCAGGGC GACGCCGATG TTTATCTCGG CTTCACTGCG GCCGTGCAAT ATGCCTTGTC CACCGACGAG TTTCGTGGCT TGCGAGTGGC CTTCGAGGAG AACACCAAAA CTTCCAATTT GCGCTTCGCA GTGCCTCGGA TTCAGACTGC GTTGCGGGAC CAACTCGATC GGGCGCTCGC GTCGATGAAC CCGGCCGACG AGGCGGCGAT CCGCATGCGC TGGCTATCCG GCAACTTCGA CGCGAAGCCT GTGCCCGCCA CGCCGCGTCT CGCGCTGACG CCGCAGGAGC AGGCCTGGCT TCATTCGCTG CCGCCGTTGC AAGTTGGGTT CGATAACAGT TGGGCGCCCT TCAGTTACGT CGACGGTTCC GGCCGGCCCG CGGGCATTGC CGCCGACTAT CTGACGTATT TGAGTCGCAC GCTCGGCGTC GTGTTCAATC GCGCAAGTAC GGCTGACTGG CCCGCCGCGA TCAATTCATT TCAGCGCGGT GAACTCGCGA TCCTCGCCAC CGCTTCGAGT CACGATCCAC GCCTTACGAA GGCGCGGCAC ACTAGCGCCT ACGAGAGCTA CCCGCTTGTG CTCGTCGGGC GCGAGGACGA ACCGGCGGCT CGCTCGTTGA ACGATTTTTC GTCACGCCGC ATTGTCGTTT CGTCGCATGT CGCCGGGGCG CTTGCACTGG CGTTCCAGCG AATTCCGGCG GACCACGTCG TGGTCGCGCC CAGTCTCGAC GAGGCGCTCA AGATGGTTGA GTCCGGCGAG GCGGACGTTC TGGTGGGCAA CGTGGCCGCC ACCGATATCC TGCTCAAGCA ACAGTACGGC GGCGTCCTCA AGATCCTTGG CACGGTTGGC GACTCCGACG CGCTCGACTT TGCCGTACGC CCGGACCTGA GCCCACTCGC TGGCTTGATC GACCGTGCAT TGCTGGCTAT GCCGCCCGCG GAAAAGCAGC GCATCCGGCA GAAGTGGGTC ACGGGCAATG CACCGGCGGC AGGCACATGG AGCGTGACCG CGGTGCGTCT GCTGCCGGTG CTGATCGGCG TCTGCGTCGT GCTGCTGATC ACCCTGCGTG CCTATCTGTT GCTGCAGCGT GAAGTCCGGC TGCGCAAGAA AACGGAGCGG GAACTGGAAC TGCAACTGAA CTTCCAGGAA ACGTTGATGA AGACGGTGCC CTATCCGCTC GTCGCCAAAG ATCTCGACGG CCGTTATCTC GCAGTCAACG AAGCCTATGA GCAAGCCTGC GGATTGAGCC GCGACGCGGT CGTCGGACGA ACCAGCTTGC AGGTGCAAAC GTGGGGCGAG GCCAATAGCC GCATCCTGGA CGAGATGACC CGCGAGATGC TGAACGGCGG CGAGACTGCG CAGGTGGAGT TGCAGTTCGA GCGCGGCGCG GGCAACGTGC GGCATGGCCT TTTCTGGACC CGAATCTGTC GCGGCAGTGA CGGGCAACCG GCTTGCGTGC TCGGCACGAT GGTCGATATC ACCGATATCC GGCGCGCTGA AATGCGTGCG CGCGAAACCG AGCGGCGCCT CTTCGACGTG ACGCGCTCGC TGCCGGCCGT CGTGTTTCAA CTGCGTCGCA CGGCGGATGG AGCGTATACG TTTCCGTATA TCAGCGGCGA CGCGCGTCAT CTGCTGGGTG GGCGAGGCAG TTTGCAGAAC GTCAGCGATC AGGTCGATTT CCAACGGGTG TGCGAGGAGG ATCGGGCGTT CGTGCTGGCT GAACTCGAGC GCTCGGCGCA TAGCGAAACG CCGGTCAACA TGGAGTTCCG TTTCGCCGGC GACCAGGACA TTAAATGGGC GCGAGCCGAA CTGGTACCGC GCCGCGAATC AGATGGAAGC GTCGTCTGGA GCGGTTACTG GGTGGACGCC AGCTTGGAGC ACGCGCGCTC CGACGAGCTT GCGCGAGCGC GCGACCTGGC CGAAGCGGCC TCCCGTGCCA AGGACGATTT CTTCGCCATG ATGAGCCATG AAATCCGCAC GCCGATGAAC GGCGTGCTCG GGCTCGTGGA AGTGCTCGAG CGCACGCCGC TCAACGCGGA CCAGGGCGAA ATGCTGGGCA TGATCCATGA GTCGGCGGGT GCGCTGCTGC AGATTCTCGA CGACCTGCTC GACTATTCGA AAATCGAAGC GGGGCGGTTG ACCATCGAGG CCGAATCCAT CGACTTACGT GAACTGGTGG ACAACGCTGT CGGCCTGCTG GCTGGCCGCG CCCATGAAAA GGGCCTGAAA GTGCGCGTGG ATATCGGGCC CGACGTCGCT GCCACCCTGC GCGGCGACAG TGTCCGACTC CGGCAGATTC TCTTCAACCT GCTAGGCAAC GCCATCAAGT TTACGCCGCA GGGCGAGGTT GACGTGTGCG TATCGGTCGT TGCGGAAGGC GACGGCATTC AGACGCTCGA AATGGTCGTC GAGGACACCG GCATCGGCAT CGCGCCAGAA GTGCAGGCCA AGCTGTTCGA GCCGTTCGTG CAGGCGGAAT CGTCCACCAC ACGGCGTTTC GGCGGCACGG GCCTCGGTTT GACGATCTGC CGCAAGCTGA TCGATCTGAT GAACGGCTCG CTCACCTTGC GCAGCGAACC GGGTAGCGGC ACGTGCATGA CCGTGCGGCT CGCCATGCCT GTCGAGACAC CGCGGTATTC GGTCAACGGC TTGCGCGGCA AACGCGGAAT CGTGGCAACC GGCGACGCGC GCGTCGCACA GGCGCTGATG CACTTTGGCG AGGCGCTTGG ACTCAAATTG CGCCACGTCT CGCCTGATGC GCCGGAACTG CACGATCGCG CTGCACTCGC CGAAATCGAT CTACTGTTCT TGAGTGAAGA TGTGATCTTG CCAGCGGACA TGAGGCCGCG CACGCGATTC ATCTGTCTGA CCGAGAAGCC GAAGCCGACG GGTTACCGCA TTCTCGACGA CAACGTGCGC GTCAGCATCA ATCCCATTTC GTGGCGCGGC CTCGGCGCCG CGTGCGCCGC TGCGATGACG GGGCTGCCGT CGGCGGGGCC TCGATCGGCG GCCATGTCGC GCACGCCGGA ATTCGGCGCT TCGCCTCCGG ATCGGGAGCG GGCCATTGCC AGTGGGCGGC TGATCCTCGT CGCAGAAGAT CATCCGGTCA ATCAGGAGTT GATCCGTCAT CAGCTCGCCT TGCTCGGTTT TGCCTGCGAC GTGGCGAACG ACGGCGCCGA GGCGCTGGCC GCGCTGGAAC ATACGAGTTA TGGCTGTCTG ATCACGGATT GCCACATGCC GAACGTGTCC GGGTACGAGC TCACGCGCCG TATTCGTGAA AATGAGCAGG ACGGCGCTTA TCGCCTGCCC ATTCTGGGTA TCACGGCGAA CACCGCGCCC GAAGACCTGA ATCTGTGCCG TGACGCGGGC ATGGACGATA GTCTCGTGAA GCCGACCCGG CTCGCCACGC TGCGTGATTA TCTGAGCCGT TGGTTCGGCA CTGACAGCGC GTGGCAAGCC GCGCCTTCGG AAGCAGTCAG CACGCCGGCG GTCGCTGTGC CTGATGTGCG TGGCGGTGCG CAACCGTTCG TGCCGGTCGA CCTCGCGCAC ATGACCCAAC TGTGGGGCAG CGAATCGACC GTCAAGGCTT TGCTCGACTC GTTCGTGTCG TCCGTGCGTG AGGACGTGCA GTCGTTGTCG CCGTTGCTCG AGCGAGTGGA GTCCGAACGT ACGGAAGTGG AACGTGTGCG CGAGTGGCTT CATCGCGTGG CGGGGGCGGC GAGCGTCCTG CAATATCCAC CGCTGCTCGA CGCACTTGAA GACTATCGGC GTGAAATCAC CATCAAACCG CCGGAACGTG TGCGTGATGA CGGGATGCTG TTAATCGACA AGTGCAATGC CATGCTCGAC GGAATTGAAC AGCAGGCCGC CTTGCTCGTA TAA
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Protein sequence | MRRVLARISL CLFAWLSLVA AQTTAVAQSF DNRSNTQVVA NFPAKLTVGV LANSWLPFDA LQDGQLTGMS VDYLRALVGP NVVIEAKAFP DLPQLLAAAC AGQVDLLTSL ARTPERERCL SFTAPYFRSS SSVVVRRDSN SYGNPAQLAG ARIALEKGFA IERVTRERFP HAQITTFAAT RDALAAVIQG DADVYLGFTA AVQYALSTDE FRGLRVAFEE NTKTSNLRFA VPRIQTALRD QLDRALASMN PADEAAIRMR WLSGNFDAKP VPATPRLALT PQEQAWLHSL PPLQVGFDNS WAPFSYVDGS GRPAGIAADY LTYLSRTLGV VFNRASTADW PAAINSFQRG ELAILATASS HDPRLTKARH TSAYESYPLV LVGREDEPAA RSLNDFSSRR IVVSSHVAGA LALAFQRIPA DHVVVAPSLD EALKMVESGE ADVLVGNVAA TDILLKQQYG GVLKILGTVG DSDALDFAVR PDLSPLAGLI DRALLAMPPA EKQRIRQKWV TGNAPAAGTW SVTAVRLLPV LIGVCVVLLI TLRAYLLLQR EVRLRKKTER ELELQLNFQE TLMKTVPYPL VAKDLDGRYL AVNEAYEQAC GLSRDAVVGR TSLQVQTWGE ANSRILDEMT REMLNGGETA QVELQFERGA GNVRHGLFWT RICRGSDGQP ACVLGTMVDI TDIRRAEMRA RETERRLFDV TRSLPAVVFQ LRRTADGAYT FPYISGDARH LLGGRGSLQN VSDQVDFQRV CEEDRAFVLA ELERSAHSET PVNMEFRFAG DQDIKWARAE LVPRRESDGS VVWSGYWVDA SLEHARSDEL ARARDLAEAA SRAKDDFFAM MSHEIRTPMN GVLGLVEVLE RTPLNADQGE MLGMIHESAG ALLQILDDLL DYSKIEAGRL TIEAESIDLR ELVDNAVGLL AGRAHEKGLK VRVDIGPDVA ATLRGDSVRL RQILFNLLGN AIKFTPQGEV DVCVSVVAEG DGIQTLEMVV EDTGIGIAPE VQAKLFEPFV QAESSTTRRF GGTGLGLTIC RKLIDLMNGS LTLRSEPGSG TCMTVRLAMP VETPRYSVNG LRGKRGIVAT GDARVAQALM HFGEALGLKL RHVSPDAPEL HDRAALAEID LLFLSEDVIL PADMRPRTRF ICLTEKPKPT GYRILDDNVR VSINPISWRG LGAACAAAMT GLPSAGPRSA AMSRTPEFGA SPPDRERAIA SGRLILVAED HPVNQELIRH QLALLGFACD VANDGAEALA ALEHTSYGCL ITDCHMPNVS GYELTRRIRE NEQDGAYRLP ILGITANTAP EDLNLCRDAG MDDSLVKPTR LATLRDYLSR WFGTDSAWQA APSEAVSTPA VAVPDVRGGA QPFVPVDLAH MTQLWGSEST VKALLDSFVS SVREDVQSLS PLLERVESER TEVERVREWL HRVAGAASVL QYPPLLDALE DYRREITIKP PERVRDDGML LIDKCNAMLD GIEQQAALLV
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