| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0630 |
|---|
| Symbol | |
|---|
| ID | 6282592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 684688 |
|---|
| End bp | 685392 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642620195 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_001894279 |
|---|
| Protein GI | 187922637 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.210211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACA CCGCCGAGGT AAGCACCCCC GTTCGCGCGA TCATCGCGGA CGATCACCCA
TTGGTGCTGT TGGCGATTGA AAACCTGATG AGCGGCTATC CGAATATGGA AATTGTCGGT
CGTGCAGCCG ACGCCACCGA ACTCTTCGCG GAAATCGATC GCAGTTCATG CGACCTTGTG
CTCATGGACC TCTACATGCC GGGCGGTTCG GATGGCAGCG GACTGGAAGC CGTCAGGCAA
TTCAAGACGC GGTACCCGGA CATCGCGCTC GTCGTGCTCA CCATGGAAAC CGAGGCGGCC
GAACTTCAAA AGGTGATTTC GCTCGGCGTC GAAGGACTGG TGAGCAAACG CGACCGGATC
GACCTGATCC ACGTGGCCGT CATCACGGCG TTGGCGCGCG AGTGCTATGT CGGGCCCGCG
GTGCGGGCGT TGATCGCGGA CGCAACGGCG ATCCAGCGGC TCGACTATGT CCGGAAGGTT
CTCTCGCGCC GCGAACTCGA AGTGTTCACC CAGTATGCGT CGGGGTACGG CGTGACTGAG
ATCGCCGCGC GTTTGGAGCG CAGCGTCAAA ACGATCAGCG CGCAGAAGTG CACTGCCATG
CGCAAGCTGG CCCTGCGCAG CGACGCGGAA CTGTTCCGGT TCGCGGTCGA GTACGGCGTG
ATTCCCGAGG AGCGCATCCC GAAGCGGCGA TGCGCCGGGC AGTAA
|
|---|
| Protein sequence | MRDTAEVSTP VRAIIADDHP LVLLAIENLM SGYPNMEIVG RAADATELFA EIDRSSCDLV
LMDLYMPGGS DGSGLEAVRQ FKTRYPDIAL VVLTMETEAA ELQKVISLGV EGLVSKRDRI
DLIHVAVITA LARECYVGPA VRALIADATA IQRLDYVRKV LSRRELEVFT QYASGYGVTE
IAARLERSVK TISAQKCTAM RKLALRSDAE LFRFAVEYGV IPEERIPKRR CAGQ
|
|---|
| |