Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0610 |
Symbol | |
ID | 6282339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 662928 |
End bp | 664115 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642620175 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001894259 |
Protein GI | 187922617 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.495333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0469856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAATC CGTCCGCCAT TTCCTCACGC ATGAGCGCGC CTGAACTGCG CGCGACCGTG TCGCTTGCCG CCATCTTCGC GCTGCGCATG CTCGGTCTCT TCATGATCAT GCCGGTGTTC TCGATCTACG CGAAGACCAT CCCCGGCGGC GACAACGTGC TGCTGGTGGG GATCGCGCTC GGCGCGTACG GCGTGACGCA GTCCATGCTG TACATCTTCT ACGGCTGGGT CTCCGACAAG GTTGGCCGCA AACCGGTCAT TGCGACCGGT TTGCTGATTT TCGCGCTCGG CAGCTTCGTC GCGGCGGGCG CGCACGACAT GACGTGGATT ATCGTCGGGC GGGTGATTCA GGGCATGGGC GCGGTGTCGT CGGCGGTGAT CGCGTTTATC GCCGACCTGA CCTCCGAGGA ACATCGCACC AAGGCCATGG CGATGGTGGG CGGCAGCATT GGCGTGTCGT TCGCGGTGGC GATCGTCGGC GCGCCGATCG TGTTCCAGTG GGTCGGCATG AGCGGGCTGT TCACGCTCGT CGGCATCTTC TCGATTCTGG CGATCGGCGT GGTGCTGTGG ATCGTGCCCG ATGCGCCGAA GCCGGTGCAC GTGCGCGCGC CGTTCGCCGA AGTGCTGCAC AACGTCGAGC TGCTGCGTTT GAACTTCGGC GTGCTAGTGC TGCACGCCAC GCAAACTGCA TTATTCCTCG TCGTGCCGCG CATTCTCGAA GCGGGCGGCT TGCCCGTTGC GTCTCACTGG AAAGTGTATT TGCCGGTCAT GGGCCTTTCG TTCGTGATGA TGGTGCCCGC GATCATTGCC GCCGAGAAGC GCGGAAAAAT GAAAATCGTG CTGCTTTCTG CGATTGCTCT TATCCTGATC GGACAGTTGT TATTGGGCGT CGCTCCGCAT ACGATTCTGA GTGTGGCGGC GATCCTTTTT GTGTACTTTT TGGGCTTCAA TATTCTCGAG GCTTCGCAGC CTTCGCTGGT GTCGAAACTG GCGCCGGGAA CCCGCAAGGG CGCGGCGGCC GGTGTGTACA ACACCACGCA ATCGATCGGT CTTGCGCTGG GTGGCGTGGT CGGCGGTTGG CTGCTGAAAG TGGATGGGCA GAGCGCAGTC TTCTTCACCT GTTCGGGGCT CGTCTTGTGC TGGCTTATAA TCGCCGCAAA GATGAAACAG CCGCCGCGCA AAGCGTAA
|
Protein sequence | MSNPSAISSR MSAPELRATV SLAAIFALRM LGLFMIMPVF SIYAKTIPGG DNVLLVGIAL GAYGVTQSML YIFYGWVSDK VGRKPVIATG LLIFALGSFV AAGAHDMTWI IVGRVIQGMG AVSSAVIAFI ADLTSEEHRT KAMAMVGGSI GVSFAVAIVG APIVFQWVGM SGLFTLVGIF SILAIGVVLW IVPDAPKPVH VRAPFAEVLH NVELLRLNFG VLVLHATQTA LFLVVPRILE AGGLPVASHW KVYLPVMGLS FVMMVPAIIA AEKRGKMKIV LLSAIALILI GQLLLGVAPH TILSVAAILF VYFLGFNILE ASQPSLVSKL APGTRKGAAA GVYNTTQSIG LALGGVVGGW LLKVDGQSAV FFTCSGLVLC WLIIAAKMKQ PPRKA
|
| |