Gene Bphyt_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0597 
Symbol 
ID6281087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp648091 
End bp648876 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content61% 
IMG OID642620162 
ProductABC transporter related 
Protein accessionYP_001894246 
Protein GI187922604 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0435549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGT CAGCGTCCCT CCCCAATCGC AAGCCGGCCG GCACCAGCAG TTCGCTGGTG 
GTGCGCAACC TGAAGAAGCG TTACGGCTCG CGCACGGTCG TCAAAGACGT GTCGCTCGAC
GTGAAAAGCG GCGAAGTGGT CGGCCTGCTC GGCCCCAACG GCGCGGGTAA GACCACTTCG
TTCTATATGA TCGTCGGCCT CGTGCCGCTC GACGCAGGCG AGATCGATCT GGACGGCAAG
TCGATCAGCC TGCTGCCGAT TCATAAGCGC GCTTCGCTGG GGCTGTCGTA TCTGCCGCAG
GAAGCTTCGG TGTTCCGCAA GTTGAGCGTC GAAGAAAACA TTCGCGCGGT GCTGGAATTG
CAGCACGAAG AGAACGGCAA GCGGCTCAGC AAAGACGCCA TCACCAACCG CACGGAAGCC
TTGCTCGACG AGTTGCAGAT TGCGCACTTG CGCGAGAATC CGGCGCTGTC GCTGTCGGGC
GGCGAGCGTC GCCGGGTTGA AATTGCGCGG GCGCTGGCTA CCAATCCGAG CTTTATTCTG
CTCGACGAAC CGTTCGCGGG CGTCGACCCG ATCGCCGTGC TGGAAATTCA GAAGATCGTC
AAATTTCTGA AGCAGCGCAA TATCGGCGTG CTGATCACCG ACCACAACGT GCGTGAAACG
CTCGGCATCT GCGATCACGC GTACATCATC AGCGACGGCA GCGTGCTGGC CGCCGGCGCG
CCGAGCGACA TCATCGAAAA CGAAAGCGTG CGGCGCGTCT ATCTGGGCGA GCACTTCCGC
ATGTAA
 
Protein sequence
MSTSASLPNR KPAGTSSSLV VRNLKKRYGS RTVVKDVSLD VKSGEVVGLL GPNGAGKTTS 
FYMIVGLVPL DAGEIDLDGK SISLLPIHKR ASLGLSYLPQ EASVFRKLSV EENIRAVLEL
QHEENGKRLS KDAITNRTEA LLDELQIAHL RENPALSLSG GERRRVEIAR ALATNPSFIL
LDEPFAGVDP IAVLEIQKIV KFLKQRNIGV LITDHNVRET LGICDHAYII SDGSVLAAGA
PSDIIENESV RRVYLGEHFR M