Gene Bphyt_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0577 
Symbol 
ID6283846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp629196 
End bp629840 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content61% 
IMG OID642620141 
Productmaleylacetoacetate isomerase 
Protein accessionYP_001894226 
Protein GI187922584 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.495555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00543361 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCTCT ACAGCTATTT TCGTAGCTCG GCGTCTTATC GCGTGCGCAT TGCGCTGAAC 
GTGAAAAATC TGCCGTACGA CTACGTGCCG GTGCATCTTG TGCGCGACGG CGGCGAGCAG
TTGAAGCCCG AATACCGCAA GGTGAACGCC GACGGGATCG TGCCGACCTT CGTCGACGGC
AATGACGTGA TGCCGCAGTC GCTCGCGATC ATCGAGTATC TGGAAGAGGT GCATCCCGAG
CCGGCGCTTT TGCCGAAGGC GCCGGCCGAT CGCGCGTATG TGCGGGCGCT GGCGTTGCAG
GTGGCGTGCG AGATTCATCC GCTGAACAAC CTGCGCGTGC TGAAGTATCT GAAGCACACA
CTGGGCGTCG ACGATTATGC CAAGGACGCC TGGTACCGCC ACTGGGTGGA AGCCGGATTC
GCGACGTTCG AAACGCATCT GGCGGGCGAT CCACGCACCG GCAAGCTGTG TTTCGGCGAT
ACGCCGACCA TTGCAGACAC CTGTCTGATT CCGCAGGTGT TCAACGCGCA GCGCTTCAAG
GTCGATACGA CTAAGTTTCC GACCATTCAG CGCATCTACG ACCATGCGAT GCAACTCGAC
GCGTTTGCGC GCGCGGCGCC GGGCGCGCAG CCGGACGCTG AGTAA
 
Protein sequence
MKLYSYFRSS ASYRVRIALN VKNLPYDYVP VHLVRDGGEQ LKPEYRKVNA DGIVPTFVDG 
NDVMPQSLAI IEYLEEVHPE PALLPKAPAD RAYVRALALQ VACEIHPLNN LRVLKYLKHT
LGVDDYAKDA WYRHWVEAGF ATFETHLAGD PRTGKLCFGD TPTIADTCLI PQVFNAQRFK
VDTTKFPTIQ RIYDHAMQLD AFARAAPGAQ PDAE