| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0544 |
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| Symbol | |
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| ID | 6281580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 595698 |
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| End bp | 597332 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620108 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_001894193 |
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| Protein GI | 187922551 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.214831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATT TGGGTAAGGA AGCTATGAAA ACAATCAAGC GAGCCCTCAT GGGCGTGCTG
GCGATGAGCG GACTGCTTTT CGCCGGTGCG GCCCTGGCAG TGGGCGATGT TCCGGGCGGC
CCTGCCGTCA ACGAGATCAA TCTCCAGCCG CCGGCGACCA AGATCGCTGA GGAGCTCTTC
AGCCTCCACA TGTTCATGCT GGTTCTTTGC CTGGTCATCT TCGTCGGCGT GTTCGGCGTG
ATGTTCTATT CGATCTTTGC TCACCGCAAA TCGAAAGGCC ACAAAGCTTC CAACTTCCAC
GAAAGCACTA CCGTCGAAAT CATCTGGACG ATCGTGCCGT TCATCATCGT CGTGCTGATG
GCGTTGCCCG CCACCAAGAC GGTGGTCGCG ATGAAAGACA CCACGAACGC CGACGTCACC
ATCAAGGTCA CCGGCTACCA GTGGAAATGG GGCTACGACT ACGTGAAGGG CCCGGGCGAG
GGCATCAACT TCCTGTCCAC GCTGGCCACG CCGCGTGCGG AAACGGATGG CCGCGAGCCG
ATTTCCACCA CGTATTTGCA GGAAGTCGAC AATCCGCTGG TCGTCCCGGT CGACAAGAAA
ATCCGCATCA TCACCACGGC GAACGACGTG GTCCACTCCT GGTACGTGCC GGCTTTCGGC
GTGAAGCAGG ACGCGATTCC GGGCTTCGTG CGCGACACGT GGTTCAAGGC TGACAAGGTC
GGCACGTTCC GCGGCTTCTG TACCGAGCTG TGCGGCAAGG AACACGCGTT CATGCCGGTG
GTGGTCGAAG TACTGTCCGC CGACGACTAC GCGAAGTGGG TCGACACGCA GAAGAAGAAA
ATGGCCGCCG GCCAGGACGA TCCGAATAAA ACCTACACGA TGGCCGAGCT GATGGAGCGC
GGCGGCAAGG TCTACGCAGC GAACTGCGCG GTCTGCCACC AGCCGACCGG CAAGGGCGCG
GGTGCATTCC CGGCGCTCGA CGGCAGCAAG ATCGCCAACG GCGCAATCGC CGAACACGTC
AGCCTGGTGC TGAAGGGCAA GAATGCGATG CCGTCGTGGG CGCCTACGCT GAACGACGTC
GAGATCGCTT CGGTGGTCAC GTACGAACGT AACTCGTGGG GCAACCACAC CGGCGATATT
CTCCAGCCGA AGCAAGTGGC CGACGCCCGC AACGGCAAGC TGCCGGAAGG CGGCAATCAC
CTGGCCGACG CAGGCGCGGC CGCGAGCGGT GCGGCGGCGG CATCCGGCGC CTCGGGCGCG
GAAGCGGCAA CAGCGTCGGC GCCGGCAGCA GCCGGTTCGG ACAGCGCGGC GCCGCAAGCG
GCACTGCCGG CCAGCATCTA CTTCGACACC GGCAAGAGCA CGCTGCCGGC CGACGCGAAA
GCGGCAGTCG ACGCAGCCGC AGCCTACGCA AAAGCACATC CGGACGCCAA ATTCGCGCTG
TCGGGCTTCA CCGACGCCAC CGGTTCCGGC GACCTCAACG CGAAGCTCGC GAAGAGCCGC
GCCGAAGCCG TGCGCGACGC GTTGAAAGCA GCCGGCATCG CCGAAGACCA TATCATTTTG
AAAAAGCCGG AAACGATCAC GGGCGGCAGC GACGCGAAAG AAGCCCGGCG CGTTCAGATT
AGTCCGGCTG CCTGA
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| Protein sequence | MENLGKEAMK TIKRALMGVL AMSGLLFAGA ALAVGDVPGG PAVNEINLQP PATKIAEELF
SLHMFMLVLC LVIFVGVFGV MFYSIFAHRK SKGHKASNFH ESTTVEIIWT IVPFIIVVLM
ALPATKTVVA MKDTTNADVT IKVTGYQWKW GYDYVKGPGE GINFLSTLAT PRAETDGREP
ISTTYLQEVD NPLVVPVDKK IRIITTANDV VHSWYVPAFG VKQDAIPGFV RDTWFKADKV
GTFRGFCTEL CGKEHAFMPV VVEVLSADDY AKWVDTQKKK MAAGQDDPNK TYTMAELMER
GGKVYAANCA VCHQPTGKGA GAFPALDGSK IANGAIAEHV SLVLKGKNAM PSWAPTLNDV
EIASVVTYER NSWGNHTGDI LQPKQVADAR NGKLPEGGNH LADAGAAASG AAAASGASGA
EAATASAPAA AGSDSAAPQA ALPASIYFDT GKSTLPADAK AAVDAAAAYA KAHPDAKFAL
SGFTDATGSG DLNAKLAKSR AEAVRDALKA AGIAEDHIIL KKPETITGGS DAKEARRVQI
SPAA
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