Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0501 |
Symbol | |
ID | 6281784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 552604 |
End bp | 553572 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642620065 |
Product | DNA-binding transcriptional activator GcvA |
Protein accession | YP_001894150 |
Protein GI | 187922508 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0370633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTTC GGCAATTGCC CGCCCTGAAC GCGATCAAGG CATTCGAGGC CGCCGCCCGC CACGAAAGCT TTTCGCGCGC AGCCGACGAG CTCTTCGTCA CCCACGGCGC CGTCAGCCAC CAGATCCGCG CGCTCGAAGC CGACCTCGGC GTCTCGCTGT TCGCGCGCGA CGGCAAACGC GTGCGGCTCA CCGAGACCGG CCGGCGCTAC GCCACGCACG TGCGCTCTGC CCTCATGGCG CTCGCCGACG CCACCCGCGA AATCCGCGCC GGCGATCGCG AGCGGCGCCT CGTGGTGTCG ATGCTGTCGT CATTTGCGGC GCGCTGGGTG ACGCCGCGCG TCGGCAGTTT TATCGAGGCG CATCCGCAGT GGGACCTCGA GCTGCTGTCT ACCAACGCGC TCACGGACTT CGCGCGGGAC GACGTCGACG TGGCGATCCG TTTCGGCTTC GGCAAATATC CGGGTCTGCA TTCGGAGTTG TTGCTGGAGG AGATTTTCTT TCCCGCCTGC GCGCCGAATT TCAACGGCGG CAAGCTGCCC CAAACCCCGG CCGATCTGGC CAAAGTCACC CTGCTGCGTT CCGACGACGA ACTCTGGCGC CCCTGGTTCG ACGCCGCCGG CCTCACCGAG TGGCCTGAGC CGAAGCGCGG CGTGCTGTAC CAGGATTCGT CGAATCTTCT GCAGGCCGCC ATCGACGGTC AGGGTGTCGC GCTCACGCGC CGCTCGCTGG CCATGCCCGA AATCGCGGCA GGCCGCCTCG TGCGGCTTTT CGATGTGGAT GGGCCGAGCC CATGGCAGTA CTACTTCATC TGCACGCCGC AGATGCTCGA AACCGCCCGT GTGAAAGCGT TTCGCGACTG GGTATTCGAG GAGGTGGGAC GCTTCAAGCA GCTTTTCGAC CGGGCGTGCG AACTACGACC CGCAGCAAGC GCCGATCGAT CGGCGAACGC ATTGCGCGTC ACGCCGTAA
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Protein sequence | MDLRQLPALN AIKAFEAAAR HESFSRAADE LFVTHGAVSH QIRALEADLG VSLFARDGKR VRLTETGRRY ATHVRSALMA LADATREIRA GDRERRLVVS MLSSFAARWV TPRVGSFIEA HPQWDLELLS TNALTDFARD DVDVAIRFGF GKYPGLHSEL LLEEIFFPAC APNFNGGKLP QTPADLAKVT LLRSDDELWR PWFDAAGLTE WPEPKRGVLY QDSSNLLQAA IDGQGVALTR RSLAMPEIAA GRLVRLFDVD GPSPWQYYFI CTPQMLETAR VKAFRDWVFE EVGRFKQLFD RACELRPAAS ADRSANALRV TP
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