| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0498 |
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| Symbol | |
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| ID | 6281539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 550138 |
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| End bp | 551367 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642620062 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001894147 |
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| Protein GI | 187922505 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0047366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGTTTCT CCACCTCCGG CCGCACGTCA TTCCCTTCCC TTGCTTCCTT CGTTCCTTCT
ACGCTTAGCC GTGCCGTGAC CCTCGGCGTG GTGCTGCCGG CCACGCTCGT CGCCAGCACC
GCGTTCGCGC AAGTGCCGCC GCCGGCCGTG AATGCGCGCT CGTGGGTGCT CGTCGACGCG
ACCAGCAACC AGGTGCTCGC CTCGGGCAAT CCGGACGAGC GCGTCGAACC GGCGTCGCTG
ACCAAGCTGA TGACGGCATA CCTCGTCTTC GAAGCACTGC AGACGAAGAA GATCAACATG
GACCAGACGG TCATGCCGAG CGAAGCGGTG CGCCGCGTGC GCACGGACGA ATCGCGCATG
TTCATCGAAG CCAACAAGCC GGTGACCGTG CACGATCTCG TGTACGGCAT GATCATCCAG
TCGGGTAACG ACGCGGCGAT CGCGCTGGCC GAACTTGTAG GCGGCAGCGA GTCGCAGTTC
GTCAACATGA TGAACAACGA AGCGCAGAAG CTCGGCATGA AGAACACGCA TTTCGCCGAC
GTGAACGGTA TGCCCGATCC GCAGCACTAC ACCACGGCGG GCGACCTCGC GGTGCTGTCG
GCGCGTCTGA TTCGCGACTT CCCTGACTAC TACAACATCT TCTCGGTCAA GGAATTCACG
TACAACAAGA TCAAGCAGCC GAACCGCAAC CGCCTGCTGT GGATCGACCC GACCGTCGAC
GGTCTGAAGA CCGGTCACAC GCAAGCCGCC GGTTACTGCC TGATCGCGAG CGCGAAGCGT
TCGCTGCCGG GCGCGACCGA CGCGTCACGC CGTCTCGTCT CGGTCATGAT GGGCGAGACC
AAGGAACACG ACCGCGTGCA GGACAGCCTG AAGATGCTGA ACTACGGCTA CAGCGCCTAC
GACACAGTGC GTCTGTACAA GGCGAATCAG GTGGTGGGCA CGCCGCGCGT CTACAAGGGT
GCGCAGGACA CCGTGCAGAT CGGCGTGAAG AGCGATCAGT ACATCACCGT GCCGAAGGGC
ATGGGCGACA AGGTGAAACC GCAGATCGAG CAGATCGATC CGCTGATCGC ACCGATCGCG
AATGGTCAGC AGGTCGGTAC GGCGAAGCTG GTGGCCGACG GCAAGGTCCT TGCGCAGTTC
CCGATCGTGG CGTTGCAGGC TGTGCCGCAA GCCGGTGTGG TCGGCCGCGT GTGGGATTCG
CTGATGCTCA TGTTCAACAA GAAGAAGTAA
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| Protein sequence | MRFSTSGRTS FPSLASFVPS TLSRAVTLGV VLPATLVAST AFAQVPPPAV NARSWVLVDA
TSNQVLASGN PDERVEPASL TKLMTAYLVF EALQTKKINM DQTVMPSEAV RRVRTDESRM
FIEANKPVTV HDLVYGMIIQ SGNDAAIALA ELVGGSESQF VNMMNNEAQK LGMKNTHFAD
VNGMPDPQHY TTAGDLAVLS ARLIRDFPDY YNIFSVKEFT YNKIKQPNRN RLLWIDPTVD
GLKTGHTQAA GYCLIASAKR SLPGATDASR RLVSVMMGET KEHDRVQDSL KMLNYGYSAY
DTVRLYKANQ VVGTPRVYKG AQDTVQIGVK SDQYITVPKG MGDKVKPQIE QIDPLIAPIA
NGQQVGTAKL VADGKVLAQF PIVALQAVPQ AGVVGRVWDS LMLMFNKKK
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