| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0493 |
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| Symbol | |
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| ID | 6281534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 545869 |
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| End bp | 546831 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620057 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_001894142 |
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| Protein GI | 187922500 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.254167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0924288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA AATCACATGC CTTCTGGGCC GGGCTCTTCA CGATCGTTTT GCTGGTGGCT
ATCGCGCTGG CGGGTTTTTT GTTCAATGTC GACCGTTCCG TGCGGGTGCC GTACGATCTG
ATCGCGCGCA CCAACGTGAC GGGCCTGTTC ACCGACGCCG CCGTGCGTTA TCGCGGGCTC
GACGTCGGCA AGGTGCAGTC CATCAAGTTC GATCCGGCTC ATCCGGGGCA AATTCTGATT
CGCATCCTCG TCGATACGCA CGCGCCGATT ACCCATTCGA CGTTCGGCAG CCTGGGTTTT
CAGGGCGTCA CGGGTATCGC CTTTATCCAG CTGGATGACA ATGGGCGCGA TCCGACGCCG
CTGGCGTCGT CGCCCAAACA GGTGGCGCAG CTGCCGATGC GCCCCGGCTT GCTCGATCAA
TTGCAGCAAC GCGGCGACGT GCTGCTGCGC AAACTCGAAA AAGTCACGGA CGATGTCGAC
CGTTTGCTGT CGCCGGAAAT GGCCGCGCAG TTGCAAGGAA CGGCCGCAAG CCTGCAGCAA
GCCGCCGACG GCGTGGCCAC GCTGACGCAG AAAATAGCGC CGGCCGCCGG GATGCTGCCC
GGCACGATCA ACCAGCTGGA TCGCACGCTG GCGTCGACCA ATCAGTTGAT CACCAGCCTG
AACCGGCCGA ACGGCCCGTT CGAGACCAAT CTGAACAAGG TCGGCACGGC CGCGCAGCAG
GCCGGCGACG CGCTGGTGTC GATCAACGGC GCCGTGCAGG AACTGTCGTC GCGGGTCGGC
TACGACACCT TGCCGCGCGT CAATTCGCTC GCTGAAGACG TGCGCTCCGC GGCCCGCTCG
GTGGACCGCG CCGCCGATAC GTTCAGCACC AGCCCGCGCA GCGTGCTGTT CGGCGCGCCG
GGTGCGGCGC CCGGCCCCGG CGAAGCGGGC TTCAAATGGC CCGCCGCGCG CGCTGCGCAA
TGA
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| Protein sequence | MENKSHAFWA GLFTIVLLVA IALAGFLFNV DRSVRVPYDL IARTNVTGLF TDAAVRYRGL
DVGKVQSIKF DPAHPGQILI RILVDTHAPI THSTFGSLGF QGVTGIAFIQ LDDNGRDPTP
LASSPKQVAQ LPMRPGLLDQ LQQRGDVLLR KLEKVTDDVD RLLSPEMAAQ LQGTAASLQQ
AADGVATLTQ KIAPAAGMLP GTINQLDRTL ASTNQLITSL NRPNGPFETN LNKVGTAAQQ
AGDALVSING AVQELSSRVG YDTLPRVNSL AEDVRSAARS VDRAADTFST SPRSVLFGAP
GAAPGPGEAG FKWPAARAAQ
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