Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0470 |
Symbol | |
ID | 6284657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 521579 |
End bp | 522358 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642620034 |
Product | short chain dehydrogenase |
Protein accession | YP_001894119 |
Protein GI | 187922477 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.382263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTCAC CCCTGAAGGT TTTCATTACC GGCGCCTCGA GTGGCATAGG CCTCGCGCTC GCCGCCGAAT ATGCGCGGCG CGGCGCGATT CTTGGCCTCG TTGCCCGCCG CGGCGACGCC CTCGCCGCCT TCCAGCAGTC CCATCCGCAG AACACCGTCT CCATCTATTC CGTCGACGTG CGCGACGCCG AAGCGCTCGC CGACGCGGCC GCACAGTTCA TCGCGCGGCA CGGTTTGCCG GATGTCGTGA TCGCCAACGC AGGCATCAGC CGCGGCGCGG TCACCGGTCA CGGCGATCTG CGCACGTTCC GCGAAGTGAT GGACATCAAC TACTTCGGCA TGGTCGCCAC CTTCGAGCCG TTCGCCGCCG CGATGATCGC CGCGAAACGT GGCACGCTGG TGGGTATCGC CAGCGTCGCC AGTGTGCGCG GCTTGCCGGG CTCCGGCGCG TACAGCGCGT CGAAATCGGC GGCGCTCAAA TATCTGGAAG CGTTGCGCGT CGAAATGCGG CCGCATGATG TCGGCGTGGT CACGATTGCG CCCGGCTATA TTCGCACGCC GATGACCGAG CACAATCCGT ACACCATGCC GTTCCTGATG GACGCCGACC GCTTCGCCGT CAAGGTGGCG CAGGCGATCG AGCGTCAAAC GGCGTTCGCG GTGTTTCCTT GGCAAATGCG CGTGGTGGCC ATGCTGCTGC ACGTGCTGCC TCGCTGGCTG TACGACCGCG CTTTCGAGCG CGCGCCGCGC AAGCCGCGCG CCACCGCCGA AGCCGAGTAA
|
Protein sequence | MSSPLKVFIT GASSGIGLAL AAEYARRGAI LGLVARRGDA LAAFQQSHPQ NTVSIYSVDV RDAEALADAA AQFIARHGLP DVVIANAGIS RGAVTGHGDL RTFREVMDIN YFGMVATFEP FAAAMIAAKR GTLVGIASVA SVRGLPGSGA YSASKSAALK YLEALRVEMR PHDVGVVTIA PGYIRTPMTE HNPYTMPFLM DADRFAVKVA QAIERQTAFA VFPWQMRVVA MLLHVLPRWL YDRAFERAPR KPRATAEAE
|
| |