Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0429 |
Symbol | |
ID | 6282914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 475485 |
End bp | 476570 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642619993 |
Product | porin Gram-negative type |
Protein accession | YP_001894078 |
Protein GI | 187922436 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.568653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA GCATCAGCAG TGCACTGAAG ACCACCCTCA AGGCAACCGC GTGTGCCGCT CTGCTGGCCA GTGCATCGTC TGCTTTTGCG CAATCGAGCG TGCAACTCTA CGGTCAGGTC GACGAATGGG TCGGCGCGCA GAAATTCCCG GGCGGCAAGA CCGCGGTGCA GGTCTCGGGC GGCGGCATGT CGACTTCGTA CTGGGGCTTG AAAGGGGCGG AGGATCTGGG CAACGGCTAC AAGGCGATCT TCGCGTTGGA GGGGTTCTTC CTGGCGCAAA ACGGCCAGTA CGGCCGCTTC ACCGGCGACA CGATGTTCTC GCGTAACGCG TACGTCGGTA TCGAGTCGCC CTACGGTACG GTCACGGCCG GTCGTCTGAC GACGCCGCTG TTCGTGTCGA CGATTCTGTT CAACCCGTTC GTCGACTCGT ACCAGTTCTC GCCGATGGTC TGGCACACGT ACCTGGGTCT CGGCACGTTC CCGACCTACT CGACGGATCA GGGCGTGACC GGCGATTCGG GCTGGAGCAA CGCGGTGTCG TACTCGTCGC CGAACTTCAA CGGCTTGAGC GCGACGGCCA TGTACGCGCT CGGCAACACG ACCGAGAACG GCGCGAAGAA GTGGAGCGGC CAGGTGCTGT ACTTCCACGG CCCGTTCGCG GCCACGGCGG TGTATCAGTA CGTGAACTTC AACAACGTGC CGAGCGACCT CGGCAGCTTC GGCACGTCGG GCGTGCCCGG CCTGAAGAGC CAGAGCGTCG CGCAAGTCGG CGCGTCGTAC GACCTGAAGT TCGTGAAATT CTTCGGCCAG TACATGTACA CGTACAACAA CCAGCAGGTC ACAAGCTGGC ACGTGAACAC GGCGCAAGGC GGCGCGACGG TGCCGTTCGG CCCGGGCTCG GTGATGGCGT CGTACGCCTA CTCGCGCGAT GGCGGCGGCT TCGACCAGAC CCGTCAGACG GCAGCGCTCG GCTACGACTA TCCGCTGTCC AAGCGCACGG ACATCTACGC CGCCTACATG TATGACCACA TCTCCAATCT GTCGAGCGGC AACACCTACG GCGTCGGCCT GCGCGCGAAG TTCTGA
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Protein sequence | MKTSISSALK TTLKATACAA LLASASSAFA QSSVQLYGQV DEWVGAQKFP GGKTAVQVSG GGMSTSYWGL KGAEDLGNGY KAIFALEGFF LAQNGQYGRF TGDTMFSRNA YVGIESPYGT VTAGRLTTPL FVSTILFNPF VDSYQFSPMV WHTYLGLGTF PTYSTDQGVT GDSGWSNAVS YSSPNFNGLS ATAMYALGNT TENGAKKWSG QVLYFHGPFA ATAVYQYVNF NNVPSDLGSF GTSGVPGLKS QSVAQVGASY DLKFVKFFGQ YMYTYNNQQV TSWHVNTAQG GATVPFGPGS VMASYAYSRD GGGFDQTRQT AALGYDYPLS KRTDIYAAYM YDHISNLSSG NTYGVGLRAK F
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