| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0415 |
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| Symbol | |
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| ID | 6284701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 454840 |
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| End bp | 456108 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642619979 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001894064 |
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| Protein GI | 187922422 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.404943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTG CGCAACAGGA AAGGACGGCC AGCGCGCCAC ATGGCTTCGG TGTCGAGATG
ACGTCGGGGC TCGAACGTTT TACGGTGCAG CATGGCGAAC TCACGCTGAG CAGCGTGTTT
CAACCGATTT TCAGCCTGTC GCATATGCGG GCGGTCGGTT ACGAAGGGCT GCTGCGTGCG
CACGACGCGC TCGACCGGCC CGTGTCGCCG CTCGACGTAT TCGGCGAGGC CGCGCGCCTG
GGCGATGTGC TGCAGGTCGA CAAGCTGGCC CAGACGCTGC ATCTGGAGAA TTTCAAGGTA
CTCGGCGCGG AGCGCGAGTG GTTGTTCCTC AACGTGCATC CGGGCGCGCT CACCGATCCT
TATCTCGCCG CTGCGTTGCT GGCTACGTTG AAGCGGCTCG ATCTGCCGCC GCGGCGCATC
GTGCTCGAAG TGCTCGAGCA TCGCGCCGAA GACCTGGAAC GTCTCGCCGA CGCCGTGCGC
CAGTTCCGCG AGCGCGGCTT CCTGATCGCA CTCGACGATT TCGGCGCGGG CCACTCGAAC
GTCGAACGGA TCTGGCAATT GAATCCCGAC ATCGTCAAGC TCGACCGCAT CATGCTGTCG
CACGCCGCGC ATCGCGCCGA CATGGCGACG ATCCTGCCGG GCCTCGTGGC GTTGCTGCAC
GAAGCGGGCA AGCTGGTGCT CGTCGAAGGC GTGGAAACAG AGCATGAAGC GCAGATGGCG
CTCGCCTGCA ACGCGGACTT CGTGCAGGGC TTTTTCTTCG GCCGTCCGAA CCCGGGCGCA
GCCGATGCGT TGCACGCGAC CACGTGCATC AGCGAACTCA CCGAGCGTTA TCGCGATCAG
GCCGACGCGC GCGAGCGCCG CAATGCCAGC CGGCTCGCGC CGTACTTGCG GGCTTTCGAG
CGGGCGGCGG AGCGGCTCGC GGCCGGCGAA CCGCTCGAGG AAGTGTGCTG GAATTTTCTC
GCGCTCGATC ATGCCGCGCG CTGTTTCCTG CTCGACGCGA AGGGCAAGCA GGCGGGCCGC
AACGTCGTGC TGCGCGCCGA TCGCGCGGCG CATGAAACGC GCTTTCTGCC GCTTGCCGAC
GCGCAAGGCG CGAACTGGCT GCGTCGTCCG TATTTCCGCG ATGCGATCAA TGCGCCGGAG
CGCGTGCATG TGACGCGGCC GTATCTGTCG ATCAACGAGG CGTTGCCGTG CGTGACGCTA
TCGGTAGCGA CGCGCGTCGG CGAGCAGACC TGCGTGTTGT GCGGCGATAT CGACTGGGTG
GATGAGTAG
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| Protein sequence | MTIAQQERTA SAPHGFGVEM TSGLERFTVQ HGELTLSSVF QPIFSLSHMR AVGYEGLLRA
HDALDRPVSP LDVFGEAARL GDVLQVDKLA QTLHLENFKV LGAEREWLFL NVHPGALTDP
YLAAALLATL KRLDLPPRRI VLEVLEHRAE DLERLADAVR QFRERGFLIA LDDFGAGHSN
VERIWQLNPD IVKLDRIMLS HAAHRADMAT ILPGLVALLH EAGKLVLVEG VETEHEAQMA
LACNADFVQG FFFGRPNPGA ADALHATTCI SELTERYRDQ ADARERRNAS RLAPYLRAFE
RAAERLAAGE PLEEVCWNFL ALDHAARCFL LDAKGKQAGR NVVLRADRAA HETRFLPLAD
AQGANWLRRP YFRDAINAPE RVHVTRPYLS INEALPCVTL SVATRVGEQT CVLCGDIDWV
DE
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