| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0412 |
|---|
| Symbol | |
|---|
| ID | 6284226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 449472 |
|---|
| End bp | 451037 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642619976 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001894061 |
|---|
| Protein GI | 187922419 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGGT TCGACCGCAT GCCTGTGTTC AGGAAACTGC TGCTGGCGTT TGCCGTGGTG
ATTGGTTTTT GCGTCGTGAT CGGCGCGACG TCGCTGAGTA CGCTGTCGTC GATGCACAGC
ATTACCGACG CCATCTGCGA TAAACACATG AACGGCCTGT ACTGGATGGA AGAGGCGAAC
CGTCACAAGA TCGATTCCGA CCTGGCCGCC GCGAATCTCG GCTACGCCGC CGACGACGCC
GGCCGTCAAA AGTTGAAGGA GAGCATTGTC GGCTCGCTCA AGGAGATGCA CGCGGCCTAC
GACCAGTATC GCGCGACGAT CGAAACGGGC AAGGGCCAGG AGATGTTCGA CGACGTGCTG
CGCAAGTCGG CGGTGTGGGA AGGCATCGTG CATCAGCAGA TCGGCCTTGA GCCGATTCCG
GCGGGCGTCG ACAACAACGA ACTCGTGCGT CGCGCGATTG CGTCGAGCGA GGCGCTGCGC
GATCGCATCA CCGCGCTGAT CGACTATCGC CGCCAGCAGG CCAACGACGC GCAAGCGGAA
GCGTCCACCG ACTATCAGCA CATGCGCATC GTCATGAGCG CGCTGGTGCT GGGCGCGATC
GTCGCGGGCA TGCTGCTCGC CATGGTGATC GCGCGTCGTC TGGCCGGGCA ACTCGGCGGC
GAACCGGATT ACGCGATGCA GATCGCCAAC CGCATCGCGG ACGGCGACTT GAGCGTGCGT
GTCGAAACGC GCGCCGGCGA CTCGCAAAGC TTGCTGTTCG CGTTGCGCAA CATGCGCGAA
CGGCTGGCCG GCATCGTGTC GGGCATCAGC GAGTCGAGCG AATCGATTTT GATGGCGTCG
GGCGAAATCG CGCAGGGCAA TACCGATCTG TCGCAGCGCA CCGAAGAGCA GGCCGCGGCG
CTGCAGGAAA CCGCGTCGAG CATGCAGGAG CTGACGTCGA CGGTGAAGAT GAACGCCGAG
AATGCGCAGC AGGCGGGTGG CGTGGCGCAC GGCGCTTCGG AAGTCGCGGC GCGCGGCAGC
CACCTCGTCG GCGACGTGGT CGACACGATG CGCGAATTGG CGGCCGGCTC GAAGCGCATG
ACGGACATCA TCGCGGTGAT CGAAGGGATC GCGTTCCAGA CCAACATCCT CGCCCTGAAC
GCGGCGGTGG AAGCCGCGCG TGCCGGCGAA CAGGGACGCG GCTTCGCGGT CGTGGCGGGC
GAAGTGCGCT CGCTCGCGCA GCGCAGCGCG GTGTCGGCGA AAGAGATCAA GGAGTTGATC
GAAAGCTCGA CCGCGCGCGT AGGCAGTGGC GCCGAACTCG CCGAGCGGGC CGGGCAGACC
ATGGCCGAAG TCACGCACGC GGTAAAACGG GTGACCGACA TCATGGGCGA GATTTCGTCG
GCGTCGCAGG AGCAAAGCAC CGGCATCGAA GAGGTCAATC GCGCTGTCGC GCAGATGGAC
GACGTGACCC AGCAGAACGC GGCGCTGGTC GAGCAGGCGG CGGCCGCGGC GGCGTCGATG
GCGGATCAGG CGAGGCAACT GCAGGCGGCC GTGACGGTAT TCTCGCTGGA AGCGCGGCAC
GGCTGA
|
|---|
| Protein sequence | MKWFDRMPVF RKLLLAFAVV IGFCVVIGAT SLSTLSSMHS ITDAICDKHM NGLYWMEEAN
RHKIDSDLAA ANLGYAADDA GRQKLKESIV GSLKEMHAAY DQYRATIETG KGQEMFDDVL
RKSAVWEGIV HQQIGLEPIP AGVDNNELVR RAIASSEALR DRITALIDYR RQQANDAQAE
ASTDYQHMRI VMSALVLGAI VAGMLLAMVI ARRLAGQLGG EPDYAMQIAN RIADGDLSVR
VETRAGDSQS LLFALRNMRE RLAGIVSGIS ESSESILMAS GEIAQGNTDL SQRTEEQAAA
LQETASSMQE LTSTVKMNAE NAQQAGGVAH GASEVAARGS HLVGDVVDTM RELAAGSKRM
TDIIAVIEGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRSLAQRSA VSAKEIKELI
ESSTARVGSG AELAERAGQT MAEVTHAVKR VTDIMGEISS ASQEQSTGIE EVNRAVAQMD
DVTQQNAALV EQAAAAAASM ADQARQLQAA VTVFSLEARH G
|
|---|
| |