Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0403 |
Symbol | |
ID | 6281175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 440007 |
End bp | 440609 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642619966 |
Product | rare lipoprotein A |
Protein accession | YP_001894052 |
Protein GI | 187922410 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTC GGTTATCCCG TGGTCTGGGG ACTCTTTTTG CCTTTTTTGT GCTGGCGGGT TGCGCCACGC CTCCGGGCGC AGGTAACACG TCGGAAAGCG GCGTGCCGCA AAGCACGAAA TTGACGCAGG CGGGCTCCTT CGGACCGCAA GCTTTCGGTA GCGCGCCGGC CTCCGACGCG ACCGCCCAAG GCTCGTCGCT GGCCGATGCG AAGCCTCTCA CCGATGAAGG TTCCGGCATT TCGGACTTTC ATCAGACCGG TCGCGCTTCG TGGTACGGCC GCGGCTTCCA TGGCCGCCGT ACGGCCAACG GCGAACGCTA CGACATGCAC GCGCTGACCG CGGCACATCG TACGTTGCCG CTCGGCTCTT ATGTGCGCGT GACCAATCCG GCCACGTCGC GCTCGGTGGT CGTGCGTATC AACGACCGTG GTCCGTATGC GCGTGGCCGC GTGATCGATC TTTCCATGGC TGCCGCGTCC GCGTTGAACA TGCGCCATGC CGGTACGGCA CGGGTGCAGA TCGAAGGTCT GACGCAGCAG GAAGCACGCG ACGCGCGTAA TGAAATGCTG GCGTCGAATT CGGATTCGAC CGCACAGAAG TGA
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Protein sequence | MKTRLSRGLG TLFAFFVLAG CATPPGAGNT SESGVPQSTK LTQAGSFGPQ AFGSAPASDA TAQGSSLADA KPLTDEGSGI SDFHQTGRAS WYGRGFHGRR TANGERYDMH ALTAAHRTLP LGSYVRVTNP ATSRSVVVRI NDRGPYARGR VIDLSMAAAS ALNMRHAGTA RVQIEGLTQQ EARDARNEML ASNSDSTAQK
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