| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0329 |
|---|
| Symbol | gatB |
|---|
| ID | 6281815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 354936 |
|---|
| End bp | 356411 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642619892 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_001893978 |
|---|
| Protein GI | 187922336 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGC AATGGGAAGT CGTGATCGGT CTGGAGACCC ACGCGCAACT GTCGACTCAA
TCGAAGATTT TTTCCGGCAC CGCGACGCAA TTCGGCGCCG CGCCGAACAC GCAAGCCAGC
CCCGTCGATC TGGCCTTGCC GGGCACGTTG CCGGTGATGA ACCGCGGCGC TGTGGAGCGC
GCGATCCAGT TCGGTCTTGC GATCGGCGCA ACGGTGGCGC CGCGCAGCAT CTTCGCGCGC
AAGAATTATT TTTACCCCGA TCTGCCGAAG GGCTATCAGA TCAGCCAGTA CGAAATCCCC
GTCGTGCAGG GCGGTCAGGT GACGATTCAG GTGCCGGCCA ATGAAAAGGC GGGTAAAGAA
GCCTACGAGA AGGTCGTCAA CCTCACGCGC GCTCACCTTG AAGAAGACGC GGGCAAGTCG
CTTCACGAAG ACTTCGCGGG CATGACCGGC ATCGACCTGA ATCGTGCCGG CACGCCGCTG
CTCGAAATCG TCACCGAGCC GGAAATGCGC AGCGCGGCGG AGGCGGTCGC TTACGCCAAG
ACGCTGCATA CGCTCGTCAC GTGGCTCGGC ATCTGCGACG GCAACATGCA GGAAGGCTCG
TTCCGTTGCG ACGCGAACGT GTCGGTGCGT CCGGTCGGAC AGGCGGAATT CGGCACGCGT
GCCGAGATCA AGAACCTGAA CTCGTTCCGC TTCCTCGAAG AAGCGATCCA GTACGAGGTG
CGCCGTCAGA TCGAGCTGAT CGAAGACGGC GGCACGGTGG TGCAGGAAAC GCGTCTGTAC
GATCCGGACA AGCGCGAAAC ACGCTCCATG CGCAGCAAGG AAGACGCGCA CGATTACCGC
TATTTCCCCG ATCCCGATCT GATGCCGCTC GTGATCGACG CGGCGTGGAT CGAGCGCGTC
AAGGCAGAGA TGACAGAGCT GCCGGTGGCG ATTCAACAGC GCTTCGTGTC GCAATACGGT
TTGACGCCGT ACGACGCTAA CGTGCTGACG TCGAGCAAAG CGATGGCCGC GTACTATGAA
GCGGTGGTGA GCAAAGTCGG TCCGGCCAAC GCCAAGGTCG CCGCTAACTG GCTGATGGGC
GAAGTGTCGT CGCAATTGAA TCGCGAGGGT CTCGACATTG CTGAGAATCC GGTGTCGTCC
GCGCAACTCG CGTTGCTGCT GCAGCGTATC GCCGACGGCA CGATCTCCAA CAAGATCGCC
AAGGAAATTT TCCTCGCGAT CTGGGAAGAG AAAGCCACGG ACGAATCCGC CGCCGATCGC
ATCATCGAGG CGAAGGGGCT GAAGCAGATT TCGGATACCG GCGCGCTGGA AGCGATCATC
GACGAAGTGC TCGCCGCGAA CCCGAAGTCG GTCGAGGAAT TCCGCGCCGG CAAGGAAAAG
GCATTCAACG CGCTGATCGG TCAGGCCATG AAAGCAACCA AGGGCAAGGC CAATCCGGCG
CAGGTGAACG AACTGCTGAA GAAGAAGCTG TCCTGA
|
|---|
| Protein sequence | MAKQWEVVIG LETHAQLSTQ SKIFSGTATQ FGAAPNTQAS PVDLALPGTL PVMNRGAVER
AIQFGLAIGA TVAPRSIFAR KNYFYPDLPK GYQISQYEIP VVQGGQVTIQ VPANEKAGKE
AYEKVVNLTR AHLEEDAGKS LHEDFAGMTG IDLNRAGTPL LEIVTEPEMR SAAEAVAYAK
TLHTLVTWLG ICDGNMQEGS FRCDANVSVR PVGQAEFGTR AEIKNLNSFR FLEEAIQYEV
RRQIELIEDG GTVVQETRLY DPDKRETRSM RSKEDAHDYR YFPDPDLMPL VIDAAWIERV
KAEMTELPVA IQQRFVSQYG LTPYDANVLT SSKAMAAYYE AVVSKVGPAN AKVAANWLMG
EVSSQLNREG LDIAENPVSS AQLALLLQRI ADGTISNKIA KEIFLAIWEE KATDESAADR
IIEAKGLKQI SDTGALEAII DEVLAANPKS VEEFRAGKEK AFNALIGQAM KATKGKANPA
QVNELLKKKL S
|
|---|
| |