Gene Bphyt_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0300 
Symbol 
ID6282449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp320259 
End bp321455 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content59% 
IMG OID642619861 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_001893949 
Protein GI187922307 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.372367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATG AAACGACGAC ACATTCCCGA CTCGGTCGCT TTGTGCAGAC TACCGTCGGC 
GGGGAGACCA TACGTGCCTT CGTCCCGCCA CGCCCGCCTC CCGAACCGCC CATCGATGTC
ATGAGCCTGC TGGACAAGCT AAGTCTTGCC GAGCGCGCGC TGGGGCGACT GGACGGCATC
ACAATGCTTC TCCCCCGCCA AGAGCTCTTC CTCTACATGT ACGTACGTAA GGAAGCCGTT
TTGTCGTCGC AGATCGAAGG TACGCAGTCC ACCCTAACGG ATCTTCTGCG CTTCGAGACT
GAGGCGCAGG CTGGTCAACC GGTCGACGAT ATCCGCGAAG TCTCGAACTA CGTGGACGCG
ATGATGTACG GTCTGGACAG GCTGCGTGAT CTACCCCTGT CACTTCGCCT GATTCGCGAG
ATGCACGCCC GCCTGTTGCA AGGTGGTCGT GGCGGGACCA AGAGCCCAGG GGAATTCAGG
AGATCACAGA ACTGGATTGG CGGTACCCGC CCGGGAAATG CGCTGTACGT GCCCCCACCA
GTCAACGAAT TGAGCCACTG CCTGGATGCG CTCGAAAAAT TTATGCACGA TGAAGGCACA
CGTCTACCCG CACTTATCAG GGCCGGACTC CTCCATGTAC AGTTCGAGAC CATTCATCCG
TTCCTTGATG GCAATGGCCG GATCGGTCGC CTGCTTGTTA CTCTTTACCT CAACGTCCAC
GGGGTGTTGC GGTCCCCGCT GCTATATCTC AGCCTGTATC TCAAGACACA TCGCGCGGAT
TACTACCGGC TCCTTCAGGA AGTTCGCGAA CGCGGGGCCT GGGAACCTTG GCTCGAGTTT
TTCCTCACCG GCGTTGCGGA AACGGCTAAT CAGGCATTCG AAGCCGCTAC ACGGATCGTC
AGCCTGTTCA AGGAAGATCG GGAACGCATC ACGACCGAAA GCGACCGTGC GGGATCGGCG
CTACGCGTTC ATGATCTCCT GCAGGAAAAT CCGTTCCTTA CCGCAAACAT TCTCGTTGAT
CGTACGGGGC TATCGGCCCC GACCATCAAC GCTGCACTTG CCGATCTCGA GCGGCTTGGC
GTTGTGGAGG AAGTGACCGG TCGGCGACGC GGGCGCGTGT TCGGTTATCG CCGGTATCTC
GCCATTCTCG GCGAGGGTAC TGATCCCCTC CCCGCGCCCA ACGCGACCGC CGACTAG
 
Protein sequence
MTDETTTHSR LGRFVQTTVG GETIRAFVPP RPPPEPPIDV MSLLDKLSLA ERALGRLDGI 
TMLLPRQELF LYMYVRKEAV LSSQIEGTQS TLTDLLRFET EAQAGQPVDD IREVSNYVDA
MMYGLDRLRD LPLSLRLIRE MHARLLQGGR GGTKSPGEFR RSQNWIGGTR PGNALYVPPP
VNELSHCLDA LEKFMHDEGT RLPALIRAGL LHVQFETIHP FLDGNGRIGR LLVTLYLNVH
GVLRSPLLYL SLYLKTHRAD YYRLLQEVRE RGAWEPWLEF FLTGVAETAN QAFEAATRIV
SLFKEDRERI TTESDRAGSA LRVHDLLQEN PFLTANILVD RTGLSAPTIN AALADLERLG
VVEEVTGRRR GRVFGYRRYL AILGEGTDPL PAPNATAD