Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0292 |
Symbol | |
ID | 6280795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 313654 |
End bp | 314643 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642619852 |
Product | periplasmic solute binding protein |
Protein accession | YP_001893941 |
Protein GI | 187922299 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAA ACCACGAGAT CGATGCGAAT ATGACCCGGC GTCACCTGTT GCACGCGACT GCGGCGAAGG CCCGGATACC GGCCCTTTCC CACGCGGTGA TCGCTGCAGC CGTACTTCTT GGCTGTGTCA ACACGGCGTC GGCGGCCCCG GCCGTGATCA AGGCGATCGG CGTCGAGAAC GAATATGCGG ATGTCATTTC GCAGATTGGT GGCCAGTACG TCCAGGTGAC GGCGATCGAG ACGGATCCGA ACACCGATCC GCATACGTTC GAGGTCAACC CGAAGGTAGC AGGCGAAATC GCGTCCGCTG ACCTTGTGGT CAAGAACGGC GTCGGATACG ACGCCTGGGC CGACAAGATC ATCGCAGCGG CACCGAATGC CAGACGCAAG GTGATCGACG TCCAGCACCT GCTCGGTCTG TCCGACAGCA CGCCGAACCC GCATCTGTGG TACGACCCGA AGACGATGCC GGCCGTCGCA AAGGAGATTG CGGCGGACCT TGCCGCGCTG GATCCAGCGC AGGCGGGCTA CTTCCAGGCC AACGCGAAGA AGTTCGATGC GTCGCTCAAG CCCTGGCTTG CGGCGATTGC TGCGTTCAAG GCCCATCACG CGGGTACTCC CGTTGCCGTG ACGGAGCCCG TTGCGGACTA CATGCTGGAG GCGGCAGGCA TCGACATCCA GACGCCCTAC AGCATGCAGG CGGCCATCAT GAACGGCACC GACCCGTCGC CGCAGGACGT GACGAAGCAG AACGCCCTGT TCACGGACCA CAAGGTGAAG GTGTTCGTCT ATAACCAGCA GGTCACGGAT GCACTCACGC AGTCGTTCCT TGCGCTGGCG AAGAAGAATG GCATCCCGGT CGTGGGTGTC TACGAGACCA TGCCGACACC GGGCTTCACG TACCAGTCGT GGATGGTGGC TGAGGTCAAC GCCCTCGACA GGGCTGTGAC AGGCAAGGGG TCGACCGAAG TGCTGCACGC AGGGAAATAA
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Protein sequence | MKENHEIDAN MTRRHLLHAT AAKARIPALS HAVIAAAVLL GCVNTASAAP AVIKAIGVEN EYADVISQIG GQYVQVTAIE TDPNTDPHTF EVNPKVAGEI ASADLVVKNG VGYDAWADKI IAAAPNARRK VIDVQHLLGL SDSTPNPHLW YDPKTMPAVA KEIAADLAAL DPAQAGYFQA NAKKFDASLK PWLAAIAAFK AHHAGTPVAV TEPVADYMLE AAGIDIQTPY SMQAAIMNGT DPSPQDVTKQ NALFTDHKVK VFVYNQQVTD ALTQSFLALA KKNGIPVVGV YETMPTPGFT YQSWMVAEVN ALDRAVTGKG STEVLHAGK
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