Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0248 |
Symbol | |
ID | 6283680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 264023 |
End bp | 265906 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642619810 |
Product | integrase family protein |
Protein accession | YP_001893899 |
Protein GI | 187922257 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACA CGCTGATCAC GCCGATCGCA GAGCGCCCCG ACTGGTATCG GATCGAGGAT GATACGGTCG TCACGCGCGA CAAGGCTGGG AATGCCGTTT CGCTGTTTGG TGACGACGCC TGGGACATCG GCGCATACGC GATTGGGCCG CGCAGCACCG GCCTCCATTT TAGGGGCCAC CTGCCTGACG GCGTGACCCG TGCTCTTTCA GAGGCGACCA CGCGTCAGTG GAAGCAGATC ATGTACTTTC TGATGCATGA AGCAACCGAT ATGGTACCGG CGTCCAGTAC GCTTCAGGCT CGTTCGGTTT ATCTGAGGGA ATTCGCATTC TTTGCCGCCG AACGGCAGCT TACGCTCTAC GAGGGGCTGT CCAATGTCCC CATTGTTCTG GACTATGTGG CACAAGCGGG GATGGAAAGG AAGGCCCAAC GCCTTCATTC AATTCTGGTG CAGCTTCACC GTCTGGGCGT CGGGACCACC GGACTGTGTG TGCCGCTGGC CCAACTACAT AAGCCTCTGC TCGATCGCTT CGCGCAACGC GCTGAATACG CACAATACCC TGTCATCCCG ACGCGGATCT ATCAGCACTT CCTGTCGACC TGTGAGCATG ACCTCGGCGT CGCTGAGGAC GTCGCTGACA TCCTGTCGGA TTACCTCGCA CGCGTGTACG CCGGCGAGAA TCCAGACGTC TCTGCAGCGG TCGCAACGAA TGCTGTGCAC TTCGGGTGCA AAGACTCCCC TTACGTCGTG TCGTCGCTTG TGGCGTCGAT CCGCGCGCTA TGCCAGCTTG TCATCCTGGC ATTCACCGGC ATGCGCGCGA GGGAAGCGGA GAACCTGCCG TACGACTGCC TGAGCGAGAC CCGTCTGGAT GGCGTGACGC ACTACACCAT CGAGGGCGTC ACAACCAAGC TGTCGGGTGG TCGTCCCAGG CGCGCGCGCT GGGTGACCAG CCCGCTCGCC GCTCGTGCCG TCCGGCTTGC GCAGCGGCTG TCGGGCGAGG CTCACCGTGC GCACGGCGCA CCGAGCTACG CCGAATCAAC GGACGGGTCA CACCTGCTGT TCTGCCGGAT GGGTCTGCGT TATGGGTACG TGGCAAACCG TGGGGCGAGT ACCCTGCATC TCGATGTCGA AGCGTTTCGT GAGCGCGTCT TCCCGACGAT CACGGTCGAG GACATTGCCG AACTGAAGCG TGTCGACATG CACCGCGCGT GGGAAGACGA ACCGAAGTAC GCGCCCGGGC AGCAGTGGCC GTTCACGCGC CACCAGCTTC GCCGGACCCT GGCCCTCTAC GCGCATCGGA GCGGACTCGT GACACTGCCG ACGCTCAAGC GTCAGTTGCA GCACATCACG CAGGAAATGA GCATGTACTA CGCCCGCGGC TCGGCGTTCG CGAAGGGCTT CATCGACATC GACAGGACCC ACTTCGCGAA GGAATGGGTT GAGACACAGA GCCTGTCCGA ATACCTTGCA TACGCCCAGC AGGTGCTGTT CTCCGACGAG CGGCTGTTCG GCGGGCACGC AGCGTGGACG CAGAGCCGTG CCGTGCAGGC CTCGCCCGTG TCGGTTTATT CGCGCGACCA GACGGTGAGG ATGTTCAGGA AGGGCGAGCT GGCGTACCGC GAGACGGTGC TGGGCGGCTG TGCCAGCATC GAACCGTGCA AGTCGACACC GCTCGACTGG ATGCGTCTGG ATTGTCTTGA GTCGAACTGC CGTAACCTCG TGGTCGTGCC GTCGAAGCTT CAGCGCGTGA TCAAGGCGCA GCAGGTTACG GTCGGGAAGC TGCGCGCTGT CGACGATGCG AGCGTCGAAT ATCGTATCGA GGTCCGGACG CTGCAACGAC TGCTTGATGC GCAGGAGAGA CTGATCAAAC CGGAGGTAAC ATGA
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Protein sequence | MNNTLITPIA ERPDWYRIED DTVVTRDKAG NAVSLFGDDA WDIGAYAIGP RSTGLHFRGH LPDGVTRALS EATTRQWKQI MYFLMHEATD MVPASSTLQA RSVYLREFAF FAAERQLTLY EGLSNVPIVL DYVAQAGMER KAQRLHSILV QLHRLGVGTT GLCVPLAQLH KPLLDRFAQR AEYAQYPVIP TRIYQHFLST CEHDLGVAED VADILSDYLA RVYAGENPDV SAAVATNAVH FGCKDSPYVV SSLVASIRAL CQLVILAFTG MRAREAENLP YDCLSETRLD GVTHYTIEGV TTKLSGGRPR RARWVTSPLA ARAVRLAQRL SGEAHRAHGA PSYAESTDGS HLLFCRMGLR YGYVANRGAS TLHLDVEAFR ERVFPTITVE DIAELKRVDM HRAWEDEPKY APGQQWPFTR HQLRRTLALY AHRSGLVTLP TLKRQLQHIT QEMSMYYARG SAFAKGFIDI DRTHFAKEWV ETQSLSEYLA YAQQVLFSDE RLFGGHAAWT QSRAVQASPV SVYSRDQTVR MFRKGELAYR ETVLGGCASI EPCKSTPLDW MRLDCLESNC RNLVVVPSKL QRVIKAQQVT VGKLRAVDDA SVEYRIEVRT LQRLLDAQER LIKPEVT
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