| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0217 |
|---|
| Symbol | |
|---|
| ID | 6282543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 233619 |
|---|
| End bp | 235835 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642619782 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001893871 |
|---|
| Protein GI | 187922229 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGCAGTG ACTATCGTTT ACACACATTG GGGTGGAAGG CATTCCAGGA CCTGTGCCTC
GCTGTTGCAC AAGAATGCCT TCAACGGCCG GTTCAGCGAT TTCTGCCATC TCATGACGGC
GGACGGGACG GAGCCTTTGT GGGTACCATG CATAGCGGGA ACAGTGCTGG GTCGTCCACA
ATTCAATGCA AATTCACGTC GCTCCCAAAC AGTAATCTGA CCTTGTCACA GCTCTCAGAC
GAGTTAGGGA AAATTCCTGC TTTGGCAGCG CAGAACTTGG TTGAAGACTA CGTGTTGATG
ACCAACCATC CGGTCTCCGG GGTGGCGAGT GCGCAAATCG AAAAGGCGTT CATCGAAGCG
GGAGCGAAGC GATGCCGTAT CTTGGGCGCT GATTGGGTGG TCAGCCAGAT TGATGAGTCT
GCTCGCTTGC GAATGCTTGT CCCTCGATTG TATGGAGTCG GCGACTTGAG CAATATTCTT
GATGAGCGCG CGTACGAGCA AGCAAAGATG ATTCTGAGTT CGATGGGAGA CGACATTCGC
AAGCTTGTCG TCACAGATGC TCATCGGAAG AGTGTTCTCG CCATAAACCA ACATGGGCTT
GTTTTATTGC TGGGGCAGCC AGCCGCAGGC AAGTCGACAA TTGGCGCAAG TCTGGCAGTC
GGTGCGGCCG ATATTTGGGG ATGCCTTACG GTCAAGCCGA CATCGCCGAT GGAATTGCGC
GAGAGAATCA ACCCTCACGA AAAACAGTTC TTCTGGGTGG ATGATGCTTG GGGTTCCACT
CAATATCAGA AGGCCGTAAC TGATACATGG AACCAAGTGC TTCCGCACAT CGCAGCTGCC
ATCAAGAACG GAAGCAAGTT TCTGTTCACG TCACGGACCT ATATCTGGCA GGCTGCGCTC
CGCGACCTCA AGACAGGTGC GCTTCCACTC CTAACAAAAA GCAACGTCAC CATCCAGGTC
GAGAAGCTGA CATCAAACGA AAAAGCTCAG ATACTGTACA ACCATCTTAA GTTTGGGGAC
CAGCCACAAT CCTTCAGAAC TCAGGTTAAA CCATATTTGC CGGACGTGGT TGCTAGCGAC
TTTTTTTTGC CGGAATCCGC AAGACGTCTC GGTAGCCAGC TTTTGACTTC GCATCTGGCA
AAAACTAGAG CTGGGTTGGT GAACTTCTTT GTCAATCCCT CGGACTTCCT CCAAGAGACA
ATACGAACTC TTACGGCGGA CAGCCAAGCC GCGCTCGCGC TTTTGTTCAT CAGCGGCGGT
CGGGTCGCAT CACCTATCCT CGATTGTCCT GAAGTAGCAT TGGCGACGAA AGCGTTTGGT
GTCACCTCCG CATCACTTAG AACAGCTGTT ATAGACCTCG GTGAGACGCT CTCACTTCAT
GTACAGGACC AAACTGGACC CTACTGGAAG TTCAAGCACC CGACCATATC GGAGGCATTT
GCCCGATATG TCGCGGACAA TCCAGAACTT GTAGAACTCT ACTTACGTGG AGCTGCGCCA
AGTTTGCTAG TGAACGAAGT GGTGTGTCCG GGAATTCAAC TGCAAGGTTC GTTTGTCGTT
GTCCCGTCCA CGTTTTACGG ACTTCTAGCC GAACGGATGA CTGCATGTAC TGCGTCGTCG
CTGACAGCGT TTCTTTCAAC GCGCGCGAAC GCTGACTTTG CTGCCATTCT ACTCAAGCTC
CGTCCCGAAC TTCTTGAGTG CGATATTTAC TTTCACTGGC GCGTATCTGA GTACCCGTCA
GCGGACTTCA TGGCTCGAAT GCAGAAATTC GGACTGCTTC CTGAGCAAAA GCGTAAGGAG
GTCGCGCAAG CGTTCGCGGA AGCAATCCTT GAACGAGCCG ATGCAAGCGT ACTGGAGGAC
GATGAACTGA TGACCGTGTT CACGGAAGAT GAGCGGGTTC AAATCTTCGA TGCAATCGAG
GACAAAATCC TGAACAACTT GGCTGCACAC GTTGATAGAA CACGTGAGCA ATGGGAGCGC
AGCACCGACC CTGATTCTCA TTTCGAAGAG CTGTCGATGG ACGTGCGCGA CTTTGCGCGG
CGTTTCGCGC CTAATCGCGA ACTGGAAATA ACATCACAGC TTAAAGGCCT CGTCCAGTCC
GCAGTTTTTG ATATGCAAGA AGACTATTCT GGTTCCGCGA GTTCAAATGC GCCTGTCGGA
AGTGGGATGG CTTCTGACGG ACCGTCGGCC GCGATATTCA GGGATGTCGA TGATTAG
|
|---|
| Protein sequence | MGSDYRLHTL GWKAFQDLCL AVAQECLQRP VQRFLPSHDG GRDGAFVGTM HSGNSAGSST
IQCKFTSLPN SNLTLSQLSD ELGKIPALAA QNLVEDYVLM TNHPVSGVAS AQIEKAFIEA
GAKRCRILGA DWVVSQIDES ARLRMLVPRL YGVGDLSNIL DERAYEQAKM ILSSMGDDIR
KLVVTDAHRK SVLAINQHGL VLLLGQPAAG KSTIGASLAV GAADIWGCLT VKPTSPMELR
ERINPHEKQF FWVDDAWGST QYQKAVTDTW NQVLPHIAAA IKNGSKFLFT SRTYIWQAAL
RDLKTGALPL LTKSNVTIQV EKLTSNEKAQ ILYNHLKFGD QPQSFRTQVK PYLPDVVASD
FFLPESARRL GSQLLTSHLA KTRAGLVNFF VNPSDFLQET IRTLTADSQA ALALLFISGG
RVASPILDCP EVALATKAFG VTSASLRTAV IDLGETLSLH VQDQTGPYWK FKHPTISEAF
ARYVADNPEL VELYLRGAAP SLLVNEVVCP GIQLQGSFVV VPSTFYGLLA ERMTACTASS
LTAFLSTRAN ADFAAILLKL RPELLECDIY FHWRVSEYPS ADFMARMQKF GLLPEQKRKE
VAQAFAEAIL ERADASVLED DELMTVFTED ERVQIFDAIE DKILNNLAAH VDRTREQWER
STDPDSHFEE LSMDVRDFAR RFAPNRELEI TSQLKGLVQS AVFDMQEDYS GSASSNAPVG
SGMASDGPSA AIFRDVDD
|
|---|
| |