Gene Bphyt_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0193 
Symbol 
ID6280832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp208765 
End bp209625 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content60% 
IMG OID642619762 
Productamidohydrolase 2 
Protein accessionYP_001893851 
Protein GI187922209 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000547733 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000789992 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACAGCCA ACCGAACGCC TCCCCGGGCG AATCCACTGG GTGCACGCAG AGACACGTCG 
CGTCCCGGTT TCCCCATTCC GGCAGGTGCG TGCGACTCAC ACATGCATAT CGTCGGGCCG
TTCGACAGAT ATCCATTGCG CGAGACGCGC TCACTCGAAC CGCCGGAGTC GACATTCGCC
GACTATCTGG AAATGAAGCG GGCGACGGGC ATCGAGCGCA ACGTGATTGT TCAACCGAGC
TTCTTTGCGA AGGACAACGC GTGCACCTTG GACTCGACCG AGCGCATGGG CGAGCATGCA
CGTGCGGTTG TCGTGGTAGA ACCGGATGTC GATGAGGCAA CCCTCGCCGA TATGCATGCC
CGAGGTGCAC GGGGCGTCAG GCTGCAGCGC GTGGTTGCCG GTGGGACGAG CACCGAGCAG
ATTGCGGAGA TGGCATCGCG TATCCGCGAT TTCGGCTGGC ACCTGCAGCT CTTCGTCGAT
TCTGATGACG TGGAAGAACT GGCAGAGCAG TTGCATCGCT TGCCGGTGCC TGTCGTCTTC
GACCATATGG CACACGTCTA TAAGGAAAGT CCCATCAGTT CGCGGGGGTT CCGGACGTTG
CTGGACCTGC TCGCTAGCGG CAAAGCCTGG GTAAAGCTAT CCGCATGGCG CTTTTCTCCG
GACAACGCAC GGGCGCGGCA ACTGGTCGAT GCGAATCCTG AACGCGTCCT TTGGGGGAGC
GATTGGCCGC ACGTCTCGTA TGAAGAAGAT GTGCCCGACG ACGGGAAGCT GCTAGACCGA
TTGGCGACGT GGGCACAGGA TTCAGCCACG ATTCAGCGAA TATTGGTAGA CAACCCTGCC
GAGCTTTACT TTCGATGCTA G
 
Protein sequence
MTANRTPPRA NPLGARRDTS RPGFPIPAGA CDSHMHIVGP FDRYPLRETR SLEPPESTFA 
DYLEMKRATG IERNVIVQPS FFAKDNACTL DSTERMGEHA RAVVVVEPDV DEATLADMHA
RGARGVRLQR VVAGGTSTEQ IAEMASRIRD FGWHLQLFVD SDDVEELAEQ LHRLPVPVVF
DHMAHVYKES PISSRGFRTL LDLLASGKAW VKLSAWRFSP DNARARQLVD ANPERVLWGS
DWPHVSYEED VPDDGKLLDR LATWAQDSAT IQRILVDNPA ELYFRC