Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0193 |
Symbol | |
ID | 6280832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 208765 |
End bp | 209625 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642619762 |
Product | amidohydrolase 2 |
Protein accession | YP_001893851 |
Protein GI | 187922209 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000547733 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0000789992 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAGCCA ACCGAACGCC TCCCCGGGCG AATCCACTGG GTGCACGCAG AGACACGTCG CGTCCCGGTT TCCCCATTCC GGCAGGTGCG TGCGACTCAC ACATGCATAT CGTCGGGCCG TTCGACAGAT ATCCATTGCG CGAGACGCGC TCACTCGAAC CGCCGGAGTC GACATTCGCC GACTATCTGG AAATGAAGCG GGCGACGGGC ATCGAGCGCA ACGTGATTGT TCAACCGAGC TTCTTTGCGA AGGACAACGC GTGCACCTTG GACTCGACCG AGCGCATGGG CGAGCATGCA CGTGCGGTTG TCGTGGTAGA ACCGGATGTC GATGAGGCAA CCCTCGCCGA TATGCATGCC CGAGGTGCAC GGGGCGTCAG GCTGCAGCGC GTGGTTGCCG GTGGGACGAG CACCGAGCAG ATTGCGGAGA TGGCATCGCG TATCCGCGAT TTCGGCTGGC ACCTGCAGCT CTTCGTCGAT TCTGATGACG TGGAAGAACT GGCAGAGCAG TTGCATCGCT TGCCGGTGCC TGTCGTCTTC GACCATATGG CACACGTCTA TAAGGAAAGT CCCATCAGTT CGCGGGGGTT CCGGACGTTG CTGGACCTGC TCGCTAGCGG CAAAGCCTGG GTAAAGCTAT CCGCATGGCG CTTTTCTCCG GACAACGCAC GGGCGCGGCA ACTGGTCGAT GCGAATCCTG AACGCGTCCT TTGGGGGAGC GATTGGCCGC ACGTCTCGTA TGAAGAAGAT GTGCCCGACG ACGGGAAGCT GCTAGACCGA TTGGCGACGT GGGCACAGGA TTCAGCCACG ATTCAGCGAA TATTGGTAGA CAACCCTGCC GAGCTTTACT TTCGATGCTA G
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Protein sequence | MTANRTPPRA NPLGARRDTS RPGFPIPAGA CDSHMHIVGP FDRYPLRETR SLEPPESTFA DYLEMKRATG IERNVIVQPS FFAKDNACTL DSTERMGEHA RAVVVVEPDV DEATLADMHA RGARGVRLQR VVAGGTSTEQ IAEMASRIRD FGWHLQLFVD SDDVEELAEQ LHRLPVPVVF DHMAHVYKES PISSRGFRTL LDLLASGKAW VKLSAWRFSP DNARARQLVD ANPERVLWGS DWPHVSYEED VPDDGKLLDR LATWAQDSAT IQRILVDNPA ELYFRC
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