Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0086 |
Symbol | |
ID | 6284097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 105093 |
End bp | 106013 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642619669 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001893758 |
Protein GI | 187922116 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCTG TCACTGAAAT GGAGATCTTC GTCGAAGTGG TGCGGCAAGG CGGTTTCTCT GCAGCAGCGC GTAGCCTCAG CCTGGCATCC TCCGTCGTAG CCGATCGTGT GGCCGGTCTG GAAAAGCGTC TCGGGGTGCC GCTGCTGCTA AGGACCACGC GCCGCCAATC GTTGACCGAG GCGGGCGAAG ATTACTTTCA GGAGGCCAGC CGCATCATCA ACGACGTGAG GACGCTGGAA AGCCGAATTG TCGAGAGCGC GACTGCCGTG CGAGGCACAC TTCACGTCAC GGCACCGAAC CCGCTAGGAC TCCGCTGGAT TGCTCCGTTC GTCGGACGGT TTGCGGCGAG CTATCCCGAT ATGGCGACCC AGCTGACGCT GGATGACCAC TTTGCTGACA TCGTCGCGCA AGGCATCGAC ATCGCGATCC GGGGCGGCCC CGCCATCGAC GCGAACCTGA TCGGGCATCA CCTGTTCGAC ACCCGGCGCG TGGTCGTTGC GAGTCCGGCG TACCTGGATG ACCACGGCAC GCCCCGCCAC CCTGACGAAC TTGCAGCGCA TCGTTGCCTG GTGTTCAACA CGCAATCCCA TCTTCATGCG GAGTGGCGTT TTGGACGGGG TCCAGCAGCC AGGAAGCTAC GAGTGACGGG CTCACTTGCA TCGACCAATT CCGCGTTGCC GGTTGCCTGG GCGGTCGCTG GTCTGGGGCT TGTCCAGAAA TCCTGGTGGG AAGTTTCGGA ACATCTCGCG GCGAGGCGAC TGGTGACGGT GCTCGACGCC TTCGAGCCCG AACCTGCAAG CTTCTATGCC ATCCATCCCG TCAGTCGCAA CAAGTCCCGC AAGGTTGCGC TGTTCGTTGA GGGCCTTGTG TCACTGTTTG CCGACATGGA TGGCGGAGTG AGGCTCCCAC GAAGGACTTG A
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Protein sequence | MHAVTEMEIF VEVVRQGGFS AAARSLSLAS SVVADRVAGL EKRLGVPLLL RTTRRQSLTE AGEDYFQEAS RIINDVRTLE SRIVESATAV RGTLHVTAPN PLGLRWIAPF VGRFAASYPD MATQLTLDDH FADIVAQGID IAIRGGPAID ANLIGHHLFD TRRVVVASPA YLDDHGTPRH PDELAAHRCL VFNTQSHLHA EWRFGRGPAA RKLRVTGSLA STNSALPVAW AVAGLGLVQK SWWEVSEHLA ARRLVTVLDA FEPEPASFYA IHPVSRNKSR KVALFVEGLV SLFADMDGGV RLPRRT
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