Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0079 |
Symbol | |
ID | 6282049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 97764 |
End bp | 98918 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642619664 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001893753 |
Protein GI | 187922111 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGATG TTTGCCTCTT TCCGGAACCC AATATGCCGA CTTCGCTATC CGGTCTGTTC CGCACCACGC TCGCCGGACC CGAGTCACGC CTCACGGAGG CATTTGACAA TCTGCGTACC CGGCTCGACT GCGTCAGCGT GCCCGAGTTC GGACTATATG GGGCCTCGGT GCCGGTTCCG GGCGACGCGG AAGAGGGCGT GTGGCGTATG GCCAGCATTC GCGACGAGAT CTTTCTGGTG ATTTCCGACT GCAACTACGC GCACAGCCGC TCCGAGAGTG TTTTGCCGGA GTCGTTCGTG GAATTTCACT TTTCACTATC CGGCCCGGCA AGCGTCGATT TTTCTGATAC CGGTACGCTG CAGGTGAATG CCCCCAACCT GCTCGTATGC CGGCAGGGTG CAGACGTGCG CTACACGGTC ACCTGTGGGC CAGGCCCATG GCAATCGGTC GGACTCTACG TGACGCAGCG TTATTTCGAC CGGTTGCTGG GTGCGGTTGG CAACGAGGCT GACCGCATTC GCGGCGAGCT CGCAGGGGTC GGATTTGACC AGATTTACAA CCGGCAGATG CCGTTTAGCG TAGACGCCCT GAACATCGTC GAGCAACTGC TGGATTCCCG CTATCGCGGT GCGCGTCAGA TGCTCTATCT GGAAGGCAAG TGTACGGAGA TACTGTGCGC ATGCATCGAG ATGTGGCTCG CGCACGCGCG CGCCGACAAC CCCGGCGAGA CGCTATCAGC GCGCGACCTG CGGCTGATTG AGCAGGCGCG GGAGATGATC GTCGGCGACC TGCGTCTTGC GCCCACGATT CCCGAACTGG CGCGCGCGGT AGGGACCAAT GCTTCGAAGC TCAAGCGTGG ATTCAAGTTC CTCTATGGGA TGACGATTTT CGAGTATGGT CATCGCTGCC GGATGGATCG TGCGCTTCGG CTTCTGGTAG GCGAACGGCA GCCGGTGGGA CAGGTGGCAT TGGCGGTCGG CTATCAGCAT CAGACCAGCT TTACCGCGGC TTTCCGTGAC TACTTTGGCT TCGCACCAAA GGACGCCCGC CGCCTGGCGA GTCCCGTCGT ATCGGGGCCA TCCCGCGTGG TTCAGCATGC CGACGAGCGA TCTGCGATCG ATGCTGCCAA GTCTGCGCCG TCGGATCAGA CATGA
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Protein sequence | MLDVCLFPEP NMPTSLSGLF RTTLAGPESR LTEAFDNLRT RLDCVSVPEF GLYGASVPVP GDAEEGVWRM ASIRDEIFLV ISDCNYAHSR SESVLPESFV EFHFSLSGPA SVDFSDTGTL QVNAPNLLVC RQGADVRYTV TCGPGPWQSV GLYVTQRYFD RLLGAVGNEA DRIRGELAGV GFDQIYNRQM PFSVDALNIV EQLLDSRYRG ARQMLYLEGK CTEILCACIE MWLAHARADN PGETLSARDL RLIEQAREMI VGDLRLAPTI PELARAVGTN ASKLKRGFKF LYGMTIFEYG HRCRMDRALR LLVGERQPVG QVALAVGYQH QTSFTAAFRD YFGFAPKDAR RLASPVVSGP SRVVQHADER SAIDAAKSAP SDQT
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