| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0072 |
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| Symbol | |
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| ID | 6284344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 89774 |
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| End bp | 90931 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642619657 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001893746 |
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| Protein GI | 187922104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGTA TAAGGGTAAT CCTGAGTACG TTGATCACAA CGGCGGCCGC ACTTGTATGC
CAGTCTGGCG CTCACGCACA AAGTAGCGTC GATCTGTACG GTGTACTGAT GAGTGGTTTC
ATCTGGACCA ACAACGTCGC TGGTGGCAAG AGTGTCAGCC CTGCCGAGGG GCCTAGTCGC
TGGGGACTGA AGGGTAACGA GGACCTGGGT GGCGGGACGA AAGCGGTCTT TACCCTGGAA
AGCGGTTTTG CGATGAGTAG CGGCCAGTCG TTTCAGGGCG GCCGCCTGTT CGGCCGCCAG
GCTTTCGTTG GTCTGTCGAA TGATGCGTTG GGAACGTTCA CCCTTGGCCG TCAATACGAT
TTTGCCAACG ACTGGCTCGC GCAGAGCAGC GCGGTCTATC GGTGGAACGG GTATTTCGCT
CACCCGGGAG ACAACGACAA TTTCAATTGG CAATTCCGCG TAAACAACGC GGTGAAGTAC
CAAAGTCCCG TGGTAGGTGG ACTGCAGATC GGCGCAATGT ATAGCTTCGG TGGCGTAGCT
GGCAGCTTCG GAAACGAGAG CGCGATGAGC TTCGGCGCGA AATACGAAAA CGGACCCGCA
AAGATCCAGG CCGCTTATTT CCATATGAAC CATCCTGCGC TCGCGGCATC CGAGGGCAAC
TGGAATACGA TGCTGTTCCC ACATATATCG GCTGCCTCAC CAAATGAGGC AAACGCGCTG
AACCCGCAGA GCATGGATAT CTACGGCATT GGTGGAACGT ACCAGATCGG GAAGACCACA
CTCGGGTTGC TATGGAGTCA CAGCGACTAC GACAAACTGG GTGATCAGGG TGATGGACTC
GCTGACGCGG ATGCGCGCTT CGACAACATC GAGGCGAACA TCGCATACAA CCTGACGCCG
CAGGTCCAGT TTGTTGGCGC GTATGCGTAC ACAATTGGCA AGGTCCATCC GACGGACTTC
GCGCCACAGT ATCACCAGGT TGACGTCGGC GTAAATTACT TCGTGTCACA CCGAACGATC
CTTTACCTCG CCGGAATCTA TCAACGTGCA GCGGGAGACG CGACATACGC GAATATCGAA
TGCGCGGGAT CCTCGTGTGC AGCGAGCAGC TCCAGGAACC AGGTTTCGGC CCTGGCCGGT
ATTTTCCATA TGTTCTAG
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| Protein sequence | MRSIRVILST LITTAAALVC QSGAHAQSSV DLYGVLMSGF IWTNNVAGGK SVSPAEGPSR
WGLKGNEDLG GGTKAVFTLE SGFAMSSGQS FQGGRLFGRQ AFVGLSNDAL GTFTLGRQYD
FANDWLAQSS AVYRWNGYFA HPGDNDNFNW QFRVNNAVKY QSPVVGGLQI GAMYSFGGVA
GSFGNESAMS FGAKYENGPA KIQAAYFHMN HPALAASEGN WNTMLFPHIS AASPNEANAL
NPQSMDIYGI GGTYQIGKTT LGLLWSHSDY DKLGDQGDGL ADADARFDNI EANIAYNLTP
QVQFVGAYAY TIGKVHPTDF APQYHQVDVG VNYFVSHRTI LYLAGIYQRA AGDATYANIE
CAGSSCAASS SRNQVSALAG IFHMF
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