Gene Bphyt_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0058 
Symbol 
ID6283432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp72638 
End bp73252 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID642619643 
Producturease accessory protein UreG 
Protein accessionYP_001893732 
Protein GI187922090 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.418935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAG TACGTTTGGG GATCGGTGGT CCGGTAGGTA GCGGCAAGAC GCGCCTGGTC 
GAGCGCCTGT TGCCGGTTTT CGCCGAGGAG GGCATTTCGG TGGCCGTCAT CACCAACGAC
CTGGTCACGC GCGAAGACGC CGAACGCGTG AAGCGCTCGG GATTGATCGA TCCCGAGCGG
GTGCTGGGCG TCGAAAGCGG GGCTTGCCCG CATACGGCGA TTCGAGAAGA TCCGTCGGTG
AACCTTGAGG CGGTCGAGTG GCTGGAGCGT CGTTTCCAGC CCGCCGTAAT CGTCATCGAA
AGCGGCGGAG ACAATCTTGC CGCGACGTTT TCGAGCGAAC TGGTGGACTG GTGGGCCTTT
GTGATCGACG TAGCCGGCGG CGACGATATT CCGCGCAAGC GGGGCCTGGG CGTGCTGCGC
GCCGATCTGC TCGTCGTCAA CAAGGTCGAT CTCGCACCGT ATGTCGACGC CGAACTGGAC
CGCATCCGCG CCGACGTAGC CAGAGCCCGT CCCGACCGGC CCTCGTTGTT TACCGATTTG
CGGCGCGGCG GCGGCGTGCG TGCCGTGTTC GACGAAATCG CCCGGGCCGC GTTGTTCGGA
TGTATCCGCG GATGA
 
Protein sequence
MTAVRLGIGG PVGSGKTRLV ERLLPVFAEE GISVAVITND LVTREDAERV KRSGLIDPER 
VLGVESGACP HTAIREDPSV NLEAVEWLER RFQPAVIVIE SGGDNLAATF SSELVDWWAF
VIDVAGGDDI PRKRGLGVLR ADLLVVNKVD LAPYVDAELD RIRADVARAR PDRPSLFTDL
RRGGGVRAVF DEIARAALFG CIRG