| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0057 |
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| Symbol | ureC |
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| ID | 6283431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 70913 |
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| End bp | 72628 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642619642 |
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| Product | urease subunit alpha |
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| Protein accession | YP_001893731 |
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| Protein GI | 187922089 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGCA GCATCGAACG CTCACGATAC GTGCAGCTTT ACGGTCCGAC CACGGGCGAT
TGCGTCCGCC TGGGCGACAC CGGCCTGTGG GCGCGGGTCG AACGCGACTT CTGCGCGGGC
GGCGACGAAC TCGTGTTCGG CGCCGGCAAG ACGCTGCGCG CCGGTACCGG CTGCGACGGC
GAACGGACCG CGGCCGACGG GGTGCTGGAT CTCGTCGTCA CCAATGCACT CGTCATCGAT
GCGGTCGCCG GGATCGTCAA GGGCGATATC GGCATCAAGG ACGGTCGTAT CGTCGGCATC
GGCAAGGCAG GCGATCCGAA CATCATGGAC GGAGTGACGC CCGGCCTGCG CGTGGGCGTG
AACACTGACA TCCGCGCGGC CGAGGGCCTG ATCGTGACGG CGGGTGGCAT CGACTGTCAC
GTGCACTTCA TCGATCCCGG CCAGGTGGAC GAGGCGCTGT GCGGCGGCAT CACCACGTTG
ATGGGTGGCG GCCTCGGCCC TACCACCGTG CCGATCGCCT CGACCGGCAC GCGCAATCTC
GGCCTGATGC TGCAGGCCGC CGAAGCGTTC CCGCTCAACT TCGGGTTCAT TGCAAAAGCA
GCGTCGCATG CCATCGAACC GCTCGTCGAA CAGTTGTCGT GCGGTGCCGC CGGCCTCAAG
ATCCACGAAG ACTGGGGCGC CACGCCGGCC GCGATCGACG CTGCGCTCAA AGCCGCCGAG
ATCGGTGGTG GCCAGATCCA GTTGCATACG GACACGCTGA ACGAATCGGG CTTCGTCGAG
CACACGCTGA AAGCCATCGG CGATCGTTGC ATCCACGCCT ATCACGTCGA GGGCGCGGGC
GGTGGCCACG CGCCCGACAT CATCCGCATC TGCGGCAGGG CCAACGTGCT GCCTTCGTCC
ACCAATCCCA CCAATCCGTT CACGATCAAT ACGTTCGACG AGCACTTCGA CATGGCGATG
ACGAGCCATC ATCTGAACCC GCGCTTGCCG GAAGACGTGG CCTTCGCCGA GAGCCGGATC
CGGCGCGAAA CGATCGGTGC GGAAGACGTG TTGCATGACC TCGGCGCGAT CAGTGCGATC
GGCTCGGACA GTCAGGGCAT GGGGCGCATC GGAGAGACCG TCGCGCGCTG CTGGCAACTG
GCCGAGCATA TGCGCGTGCT GCGCGGCAGC CTGGCGGAGG ACCGCGGGTC CGGCGCCGAC
AATTTTCGCA TCCTGCGCTA TATCGCCAAG TACACGATCA ACCCGGCGCG CATGTTCGGC
ATCGACGGCG AAGTGGGCTC GGTCGAGGCT GGCAAGCTGG CGGATCTGGT GTTCTGGCGT
CCCGACAGTT TCGGGGCAAA GCCGGAGCTG GTGATGAAGG CTGGCTTTCC GGTGTGGGCG
CCGCTCGGCG AAGCCAATGC TTCGCTGATG ACCTGTGAGC CATTGCGCTA CCGACCCATG
TGGGGCTGCT TCGGCCGCGC GCCGCAGGCG CTTGGCGTTC GCTTCGTGGC GCCACCGTCG
ATCGCCGCCG ATGTGGGGCG CCGCCTGGAC CTGAAGGCCA AGCTGGTGCC GGTCGCGGAC
ACACGCGGGC TGACCAAGCG GGACATGATC CGCAACGACA TGGTCGCACC GATCAACGTC
GATCCGGAAA CCTTCCGCGT CAGCGTCGAC GGACAGATCA TTGATAGCGC GCCCACCGAG
CGCGTGGCAC TCGGCATGTC GTACATGCTC AAGTAG
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| Protein sequence | MACSIERSRY VQLYGPTTGD CVRLGDTGLW ARVERDFCAG GDELVFGAGK TLRAGTGCDG
ERTAADGVLD LVVTNALVID AVAGIVKGDI GIKDGRIVGI GKAGDPNIMD GVTPGLRVGV
NTDIRAAEGL IVTAGGIDCH VHFIDPGQVD EALCGGITTL MGGGLGPTTV PIASTGTRNL
GLMLQAAEAF PLNFGFIAKA ASHAIEPLVE QLSCGAAGLK IHEDWGATPA AIDAALKAAE
IGGGQIQLHT DTLNESGFVE HTLKAIGDRC IHAYHVEGAG GGHAPDIIRI CGRANVLPSS
TNPTNPFTIN TFDEHFDMAM TSHHLNPRLP EDVAFAESRI RRETIGAEDV LHDLGAISAI
GSDSQGMGRI GETVARCWQL AEHMRVLRGS LAEDRGSGAD NFRILRYIAK YTINPARMFG
IDGEVGSVEA GKLADLVFWR PDSFGAKPEL VMKAGFPVWA PLGEANASLM TCEPLRYRPM
WGCFGRAPQA LGVRFVAPPS IAADVGRRLD LKAKLVPVAD TRGLTKRDMI RNDMVAPINV
DPETFRVSVD GQIIDSAPTE RVALGMSYML K
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