| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0053 |
|---|
| Symbol | |
|---|
| ID | 6284005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 66845 |
|---|
| End bp | 67681 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642619638 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001893727 |
|---|
| Protein GI | 187922085 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGC TCGTTCTCGA TGTCCTGACA ACGGCATCGA TTCTGTTCGT TGTAGCCAGC
GGATTGCTGC TCGTGTTCGG CGTAATGAAG ATCATCAATT TCGCGCACGG CGCGGTCATC
ACGCTGGGCG GCTACGCCGC GCTGGCATGT ACCGGGTTGG GCATGAACCC CTGGCTGGGC
TTGCCGCTGG GCGCGCTGGT CGGTGGCGTC GCGGGCGTCG TGGTCGAGTC TCTGGCCGTG
CGACCGCTCT ACGCACGGCC GCTGGATGCG ATCCTCGCCA CCTGGGGGCT CGGCATCGTC
ATCAGCCAGG TCGTGACCTT GTGCTTCGGC CGCGGTGTGC ACTTTGCCCG TTCGCCCTTG
ACGGGGACGG TGAACGTGCT GGGAACGGAG TACTCGCTCT ATCGGCTCAG CCTCGTACTG
GTCGCTCTGG CACTCGGCGG CCTGCTGACG TTGCTGCTGC AGGGCACGCG CCTCGGTCTC
GAGACACGCT CCGTGATCAT GAACGAGGAT CTGGCCCGCG GGCTCGGCAT CAATAGCGGC
CTGGTGCGGT TCGTGACCTT TTCGCTCGGC TCGGCGCTGG CCGGTATAGC GGGGATGGTG
ATCGCACCGC TGTCGAGCAT CGATCCGAAC ATGGGTGTGC CCTGGCAGGT CAACGCGTTC
ATGCTGGTGA TGGTGTCCGG CTATTCGCTG CTGACGCTGG CCGTTTCCTG TCTGGTCCTT
GGAGCCGCGC AGGTGCTGAT CAGCGTCTAT ATCGATCCCA TACTCGGCGG ATTGACCATC
ACGGTGCTGG CTGCCGTGAT TCTGCGCATC CGTCCGGAAG GATTTGCCCG TGTCTGA
|
|---|
| Protein sequence | MIALVLDVLT TASILFVVAS GLLLVFGVMK IINFAHGAVI TLGGYAALAC TGLGMNPWLG
LPLGALVGGV AGVVVESLAV RPLYARPLDA ILATWGLGIV ISQVVTLCFG RGVHFARSPL
TGTVNVLGTE YSLYRLSLVL VALALGGLLT LLLQGTRLGL ETRSVIMNED LARGLGINSG
LVRFVTFSLG SALAGIAGMV IAPLSSIDPN MGVPWQVNAF MLVMVSGYSL LTLAVSCLVL
GAAQVLISVY IDPILGGLTI TVLAAVILRI RPEGFARV
|
|---|
| |