Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0040 |
Symbol | |
ID | 6283992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 51437 |
End bp | 52348 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642619625 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001893714 |
Protein GI | 187922072 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAGAC GTAACCTCAA CGATCTCCTG TATTTCGTGA CAGTGGCGCG GGAAGGCAGC TTCACGCGTG CCGCTGCTTT GCTGGGCGTG ACCCAGTCGG CACTCAGTCA GGCCATCGCC GGCCTGGAGG CAAGGCTTGA GATCCGGCTG CTGACGCGAA CCACCCGCAG TGTGTCGGCC ACGGCTGCGG GCGAACGTCT GTTGAAGGCC ATCGGCCATC GCTTCGAGGA AATCGAAGCC GAACTGGATG AGCTGACGCA GATGCGGAAC AAGCCAGCCG GCACGGTGCG GATTACCTGC GGTGAGCATG TCCTGCGGAC AACGTTGCTG CCCAAGCTCA AGCCGCTATT GCGCGACTAT CCCGATATCA ATGTCGAGTT CGATGTCAAC TACGGGTTCA GGGACATCGT GGCCGATCGC TTCGACGCGG GTGTGCGCCT GGGGGACACC ATCGACAAGG ACATGATTGC GGTGCCCATC GGGCCGCCGG TGCGCATGGC TGTTGTGGCG TCGCCGGCAT ACTTCGCTGC CCGCCCGGTT CCCAAAACGC CGCGTGACCT GTTGAGCCAC AATTGCATCA ACCAGCGCAT GCAGACGGCA GGTGGGTTGT ACGTCTGGGA TTTCGAGCGC CGGGGCAAGA GGCAGAATGT GCGGGTCAAC GGACAGCTCA TCTTTAACAC GTCGCCCGGC ATGGTGGACG CCGCGTTGGC GGGATTGGGC ATCGCCTTCC TCCCCGAGGA TGAATTCGCG CCGCACATCA AGGAAGGCCG TCTGGTGCGC GTCCTGAACG AGTGGTGCGC TTCCTTTCCC GGCTATTACC TGTATTACCC AAGCCGGCGT CAGCCTTCTC CGGCGTTTTC GCTGGTTGCC AACGCGCTGC GTGTGACGGG TACCACGGCT CCCGGACAAT GA
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Protein sequence | MVRRNLNDLL YFVTVAREGS FTRAAALLGV TQSALSQAIA GLEARLEIRL LTRTTRSVSA TAAGERLLKA IGHRFEEIEA ELDELTQMRN KPAGTVRITC GEHVLRTTLL PKLKPLLRDY PDINVEFDVN YGFRDIVADR FDAGVRLGDT IDKDMIAVPI GPPVRMAVVA SPAYFAARPV PKTPRDLLSH NCINQRMQTA GGLYVWDFER RGKRQNVRVN GQLIFNTSPG MVDAALAGLG IAFLPEDEFA PHIKEGRLVR VLNEWCASFP GYYLYYPSRR QPSPAFSLVA NALRVTGTTA PGQ
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