Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0025 |
Symbol | |
ID | 6282858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 35941 |
End bp | 36990 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642619612 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001893701 |
Protein GI | 187922059 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.258502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCG ACACTCTCAG CGACAGCCTG TCCAGTCCAA CGCTCACGCC GCAGCCGAGC TTCCGTGTGC AGACCTGCGT TGCGCACGAC GCCGACGAAC AGGCGCGCAA TCTTCATGGG TGGAGCCAGA CCTACGACCA GTTGACGGCA GGATGTTTTG TCGGCGGCCT GACGGAGCTG TGCCTCGATC ACATGCAGGT GTTCGTCGAA ACGACCAGCC ACACGCTGCG GCAAACCTGC GAGGTGCAAA AGGACGCGTA CTGGTTCGGT GTCCCGACTT GCCCCGCGGG TTCGGGACGC ATCGACGCTC AGGTAATTGC CGGCGATGCG CTCGCGTTTC GTCCAGGCGG CATCGAATTC GAACTGCTGA CTTCGGCGGG TTACGAGATT TTTGGTGTGG TCGTCAAAGG CGAAGTGCTG CGCCGTTACG CGGCGGAAGT GGAGCGCGTC GGTCTGACGG ATCATGTGCC GAACACGCAA GTCGTGCCGA TCGGCATGGC TCGCAAGCAG CAGTTGTGCG CCACGCTGCG TCAATTGCTC GACGATGGCG CGGCGCGCGG CACGCCGCTC TCTTCGGTCG CGCGCAACAA TCTGCAGGCG TCGGTGCTGG CTTCGCTCTT CGACGTCGGC GCGTTGCCGG CGTCGGAGCC GGTCGCGATG CCGGCGCGGC CACGTCGTCA GTCGATCGTG TCGGAAGCGC GTGACTATGT GCTGATCAAT CGCGAGCGGG CCGTGAGCGT GCCGGAGTTG TGCGAGCAGC TGCACGTGAG CCGGCGTACG CTGCAGTACT GCTTTCAGGA CGTGCTCGGC ATAGCGCCCG CCACGTATCT GCGCGCAATC CGTCTGAATG GCGCGCGGCG CGATCTTTCG AATGCGTCGC GCGAATCACG CTCGGTGCAA GACGTGGCGG CGGCGTGGGG TTTCTGGCAC CTGAGCCAGT TCGCAACCGA TTACCGGAAG CTCTTCGGCA TGCGGCCCTC GGATACGTTG AAGGCCGCGA TTGGTTCGCA TCACCATCCG ATTGCGGATG AGCGCTCATT CGCGCATTGA
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Protein sequence | MTIDTLSDSL SSPTLTPQPS FRVQTCVAHD ADEQARNLHG WSQTYDQLTA GCFVGGLTEL CLDHMQVFVE TTSHTLRQTC EVQKDAYWFG VPTCPAGSGR IDAQVIAGDA LAFRPGGIEF ELLTSAGYEI FGVVVKGEVL RRYAAEVERV GLTDHVPNTQ VVPIGMARKQ QLCATLRQLL DDGAARGTPL SSVARNNLQA SVLASLFDVG ALPASEPVAM PARPRRQSIV SEARDYVLIN RERAVSVPEL CEQLHVSRRT LQYCFQDVLG IAPATYLRAI RLNGARRDLS NASRESRSVQ DVAAAWGFWH LSQFATDYRK LFGMRPSDTL KAAIGSHHHP IADERSFAH
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