Gene Bphyt_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0025 
Symbol 
ID6282858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp35941 
End bp36990 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content64% 
IMG OID642619612 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001893701 
Protein GI187922059 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.258502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG ACACTCTCAG CGACAGCCTG TCCAGTCCAA CGCTCACGCC GCAGCCGAGC 
TTCCGTGTGC AGACCTGCGT TGCGCACGAC GCCGACGAAC AGGCGCGCAA TCTTCATGGG
TGGAGCCAGA CCTACGACCA GTTGACGGCA GGATGTTTTG TCGGCGGCCT GACGGAGCTG
TGCCTCGATC ACATGCAGGT GTTCGTCGAA ACGACCAGCC ACACGCTGCG GCAAACCTGC
GAGGTGCAAA AGGACGCGTA CTGGTTCGGT GTCCCGACTT GCCCCGCGGG TTCGGGACGC
ATCGACGCTC AGGTAATTGC CGGCGATGCG CTCGCGTTTC GTCCAGGCGG CATCGAATTC
GAACTGCTGA CTTCGGCGGG TTACGAGATT TTTGGTGTGG TCGTCAAAGG CGAAGTGCTG
CGCCGTTACG CGGCGGAAGT GGAGCGCGTC GGTCTGACGG ATCATGTGCC GAACACGCAA
GTCGTGCCGA TCGGCATGGC TCGCAAGCAG CAGTTGTGCG CCACGCTGCG TCAATTGCTC
GACGATGGCG CGGCGCGCGG CACGCCGCTC TCTTCGGTCG CGCGCAACAA TCTGCAGGCG
TCGGTGCTGG CTTCGCTCTT CGACGTCGGC GCGTTGCCGG CGTCGGAGCC GGTCGCGATG
CCGGCGCGGC CACGTCGTCA GTCGATCGTG TCGGAAGCGC GTGACTATGT GCTGATCAAT
CGCGAGCGGG CCGTGAGCGT GCCGGAGTTG TGCGAGCAGC TGCACGTGAG CCGGCGTACG
CTGCAGTACT GCTTTCAGGA CGTGCTCGGC ATAGCGCCCG CCACGTATCT GCGCGCAATC
CGTCTGAATG GCGCGCGGCG CGATCTTTCG AATGCGTCGC GCGAATCACG CTCGGTGCAA
GACGTGGCGG CGGCGTGGGG TTTCTGGCAC CTGAGCCAGT TCGCAACCGA TTACCGGAAG
CTCTTCGGCA TGCGGCCCTC GGATACGTTG AAGGCCGCGA TTGGTTCGCA TCACCATCCG
ATTGCGGATG AGCGCTCATT CGCGCATTGA
 
Protein sequence
MTIDTLSDSL SSPTLTPQPS FRVQTCVAHD ADEQARNLHG WSQTYDQLTA GCFVGGLTEL 
CLDHMQVFVE TTSHTLRQTC EVQKDAYWFG VPTCPAGSGR IDAQVIAGDA LAFRPGGIEF
ELLTSAGYEI FGVVVKGEVL RRYAAEVERV GLTDHVPNTQ VVPIGMARKQ QLCATLRQLL
DDGAARGTPL SSVARNNLQA SVLASLFDVG ALPASEPVAM PARPRRQSIV SEARDYVLIN
RERAVSVPEL CEQLHVSRRT LQYCFQDVLG IAPATYLRAI RLNGARRDLS NASRESRSVQ
DVAAAWGFWH LSQFATDYRK LFGMRPSDTL KAAIGSHHHP IADERSFAH