Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0015 |
Symbol | |
ID | 6282548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 21119 |
End bp | 24493 |
Gene Length | 3375 bp |
Protein Length | 1124 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642619602 |
Product | conserved hypothetical cytosolic protein |
Protein accession | YP_001893691 |
Protein GI | 187922049 |
COG category | [S] Function unknown |
COG ID | [COG4913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATA TGCAATTGCC CGGACTCGAT TTCGTCGCCG ACGACGCTCT GTCCGGTTTT CGCCTGCATC AACTGGAAGT CTTTAACTGG GGGACTTTCG ATCGCCGCGT CTGGACGTTG AATCCCGCTG GTAAGAACGC ACTGTTGACG GGCGACATCG GCTCCGGCAA ATCGACGCTT GTCGATGCCG TGACGACGCT GCTCGTACCC GCACACCGGA TAGCCTATAA CAAAGCTGCG GGCGCCGATA GCAAGGAGCG AACGCTTCGC TCGTACGTGC TCGGCCACTA CAAGTCAGAA CGTAACGAAG CCAGCGGTGC AGCCAAGCCC GTGGCTCTGC GCGATTCCGA CAGTTATTCG GTGATTCTTG GGCGCTTCCA CAATGCGGGC TATGACCTGA CCGTCACGCT GGCCCAGGTG TTCTGGATGA AGGAGCCGCA CGGTCAGCCC GCGCGACTGT TCATTGGCGC GGAACGCGCG CTGTCGATCG CGACGGACTT TGCCGCCTTC GGACCGGACA TCTCCGGCCT GCGCAAAAAG TTACGAGCGC TCGGCGCGGA CGTGTTCGAC AGTTTTCCGC CCTACGGTGC ATGGTTCCGC CGGCGCTTCG GAATCGAGAA TGAGCAGGCG CTCGAGCTAT TCCATCAAAC GGTATCCATG AAGTCGGTGG GCAATCTGAC GGATTTTGTC CGCAGCCACA TGCTTGAGCC GTTCGATGTC GCATCGCGCA TGACCGCGCT GATCGGTCAT TTCGACGACC TGAACCGCGC GCATGGGGCC GTGTTGAAGG CGAAGCGGCA AATGGAAAGT CTGAGTCCGC TCGTCGAAGA TTGCGAGCGG CATGCGCAGC TTGTGTCGCA GGTAGAGGAT CTGCGAGCCT GCCGTGACGC GATGAAATCG TATGCCGCCG ACCTCAAGCT TCGATTGCTC GACCGCCGAA TCGACATTCT CGCGGCGGAG TGGGAGCGGC AGGACGCCCA CGTCAAGCGG CTTGACGTCA AACGCTCTGC ACATCGTGTC GAAGAAGCCG AACTGCGGCG CAACATCGCC GAAAACGGCG GAGACCGGCT GGAGCGGCTG GAAGCGGAGA TCCAATCGAA AGATGCGGAA TGTACCCGGC GCAGACAGAA AGCACAGCGT TTCGACGATC TCGCGCAGGT GGCCGGCGAA CAGACACCTG AGGACGAACA GTCGTTTCTC GCGTTGCGCC GACATCTGAC CGAACGTCTC GACGCCGCGC AGTCGGACGA GGCGCGTTTG CAGAACGACT TGACCGAACA CGGCGTCAGC TTCCGCGCTG GCCGACAGGA ACATGACGCG CTGTCGGCAG AAATCGACAG TCTGAAGAGT CGCCGCAGCA ATATCCCTGC GGAACAGATT GCGATGCGCG CGGCGTTGTG CAATGCCCTT GCGCTTCCTG AAGCGGATGT ATGCTTCGCT GGCGAACTCC TGCAGGTGCG TGAGGATGAG CGCGATTGGG AGGGTGCAGC TGAACGGCTG CTGCGAAGTT TTGGCCTGTC GCTCCTGGTC TCGGATGAAC ATTACGCCGC TGTCACCGAA TGGGTTGATA AGACTCACCT CAGAGGGCGG CTCGTTTACT TTCGAGTTCG GCAATCCGCC AGACGTGAAC GTCCCGAACT GCATCGCGAT TCGCTGGCCC GTAAGCTGTC GGTCAAACCT GAATCGCCGT TCTACGAATG GCTGGAATAT GAAGTGGCGC AGCGCTTCAA CGTCGTCTGC TGCGACACGC AGGAACAGTT CCGCCGCGAG ACGCGGGCCA TTACACGTGC CGGCCAGATC AAGGCGCCGG GCGAGCGGCA CGAGAAAGAC GACCGCCATC GGCTGGACGA TCGTCGACGT TACGTGCTGG GCTGGACAAA TACCGCAAAA ATTCAGGCGC TCGAAGCGCA ATCAGACCAG TCCGCTTCGC AGTTGCGCGA GTTGGGCACG CTGATCAGTA AAATTCAGTC CGAGCAAATT GAATTAAAGA CGCGCTTGAA CGCGCTATCG CTGCTCAGCG AACATGCGGA GTACCGCGAG ATCGACTGGC GCGGCGTAGC GACCGAGATC GCCGATCTCC GTGATGAGAA GGCTCGTCTG GAATCCGCCT CTGACTTGCT GCATGAACTC ACCCAGCGTC TGAATCAGGT CGACGCCGCG CTGGTTGCCG TGGAGGCGGA GCTCGATGAA GACAAGGCCG AGCGCACGCG TATCGAAGAG CGGCAGCGGA TAGCCGACGA CTTGCATATG CAAGCCCAAG CAGTTCTTGA CGATCCCGCC TACTCGACCC ATAGGGCTTA TTTCGAACGG CTTGCCGATC TGTGGTCCGA AGCGCTCGGC AAGCATCAGT TGACTGTCGA ATCCTGTGAC AATCGCGAGA GCGACATGCG CAAATGGCTA CAGGATAATA TCGACGCCGA GGACAAAAAG GTTTCGCGCC AGCGCGAGAA GATCGTGGTG GCCATGCGCG AATACTGCAC GGCCTTCCCC CTCGAGACGC AGGAAGTGGA TGTGGCCATT GAAGCAGCGC AAGAATATCG GGCGATGCTC GACACGTTGA AAGCCGACGA TCTGCCGCGC TTCGAAGCTC GCTTTAAAGA TTTGCTCAAC GAGAACACCA TTCGCGAAGT CGCCAACTTC CAGTCCCAGC TGGCTCGCGA ACGCGAGACG ATAAGAGAGC GGATCGCGTT GATCAACGAG TCACTCACGC AGATCGACTA CAACGCTGGC CGCTATATCG TTCTGGAAGC GCAATTGAGC CAGGACGCGG AGATTCGAGA CTTTCAGAGC GATTTGCGTT CGTGCACCGA AGGCACGCTG ACAGGCTCGG AAGACGTGCA ATATTCCGAA GCCAAGTTTC TTCAAATCAA ACAGATCATC GAACGATTTC GTGGACGCGA GGGGCTGACC GAGCAGGATC GTCGCTGGTC AGCGAAAGTC ACCGACGTGC GCAACTGGTT CGTATTCGCC GCCAGTGAGC GTTGGCGCGA GGATAACAGC GAGCACGAGC ATTATTCAGA CTCAGGTGGC AAATCTGGCG GACAGAAAGA AAAGCTCGCC TATACGATCC TGGCCGCGAG CCTCGCCTAC CAGTTCGGTC TCGAGTGGGG TGCCGTACGC TCACGCTCTT TCCGATTCGT CGTCATCGAC GAAGCATTTG GGCGCGGATC CGACGAGTCC GCGCAGTACG GCTTGCGGCT TTTCGCTCAG CTGAATCTGC AACTGCTGAT CGTCACCCCG TTGCAGAAGA TTTATATCAT CGAGCCATTT GTAGCCAGCG TCGGATTTGT CGACAATCGG GAGGGACGTG AATCGAGGTT GCGCAATCTT TCGATCGAAG AGTATCGCGA GGAAAAAGGC AGGAGCGAAA CGTGA
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Protein sequence | MTDMQLPGLD FVADDALSGF RLHQLEVFNW GTFDRRVWTL NPAGKNALLT GDIGSGKSTL VDAVTTLLVP AHRIAYNKAA GADSKERTLR SYVLGHYKSE RNEASGAAKP VALRDSDSYS VILGRFHNAG YDLTVTLAQV FWMKEPHGQP ARLFIGAERA LSIATDFAAF GPDISGLRKK LRALGADVFD SFPPYGAWFR RRFGIENEQA LELFHQTVSM KSVGNLTDFV RSHMLEPFDV ASRMTALIGH FDDLNRAHGA VLKAKRQMES LSPLVEDCER HAQLVSQVED LRACRDAMKS YAADLKLRLL DRRIDILAAE WERQDAHVKR LDVKRSAHRV EEAELRRNIA ENGGDRLERL EAEIQSKDAE CTRRRQKAQR FDDLAQVAGE QTPEDEQSFL ALRRHLTERL DAAQSDEARL QNDLTEHGVS FRAGRQEHDA LSAEIDSLKS RRSNIPAEQI AMRAALCNAL ALPEADVCFA GELLQVREDE RDWEGAAERL LRSFGLSLLV SDEHYAAVTE WVDKTHLRGR LVYFRVRQSA RRERPELHRD SLARKLSVKP ESPFYEWLEY EVAQRFNVVC CDTQEQFRRE TRAITRAGQI KAPGERHEKD DRHRLDDRRR YVLGWTNTAK IQALEAQSDQ SASQLRELGT LISKIQSEQI ELKTRLNALS LLSEHAEYRE IDWRGVATEI ADLRDEKARL ESASDLLHEL TQRLNQVDAA LVAVEAELDE DKAERTRIEE RQRIADDLHM QAQAVLDDPA YSTHRAYFER LADLWSEALG KHQLTVESCD NRESDMRKWL QDNIDAEDKK VSRQREKIVV AMREYCTAFP LETQEVDVAI EAAQEYRAML DTLKADDLPR FEARFKDLLN ENTIREVANF QSQLARERET IRERIALINE SLTQIDYNAG RYIVLEAQLS QDAEIRDFQS DLRSCTEGTL TGSEDVQYSE AKFLQIKQII ERFRGREGLT EQDRRWSAKV TDVRNWFVFA ASERWREDNS EHEHYSDSGG KSGGQKEKLA YTILAASLAY QFGLEWGAVR SRSFRFVVID EAFGRGSDES AQYGLRLFAQ LNLQLLIVTP LQKIYIIEPF VASVGFVDNR EGRESRLRNL SIEEYREEKG RSET
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