Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_7719 |
Symbol | |
ID | 6249302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010627 |
Strand | - |
Start bp | 487601 |
End bp | 488392 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642599249 |
Product | ABC transporter |
Protein accession | YP_001863655 |
Protein GI | 186474684 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.428101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCG AAGTTTTCGT GATGGCTATG CCCACCAACA CTTGGAACTG GCGCATGGTA TGGCGCCGCA ATTATCTAGC GTGGCGAAAA ACTGCACTCG TTTCGCTTAT CGGTAACCTT GCGGACCCGA TGATGTATCT GTTCGGATTA GGTTTCGGCG TGGGAATAAT GATAGGCCGC ATCGAAGGCA CTTCCTACGT AGCCTTTTTG GCGGCTGGAA TGGTAGCGAC AAGCGCAATG ACTTCCGCGA CGTTCGAAAC GATTTATGCG ACTTTCGCTC GCATGCACAT TCAGCGCATG TGGGAAGCAG TCTTGTGTAC TCAACTCACG ATCGGCGACG TCGTTCTCGG TGAATTGGCT TGGGCAGCAA CAAAAGCCCT TTTGGCCGGC ACGGCTGTTA CGGTGGTTGC CACGACGCTG GGCTATGCGG CCTTTCCGGG CATTCTTTAT GTCATTCCTG TCGTTATCTT AACTGGCCTC GCCTTCGCGA GTATTGCCAT GGTCCTCATC GCGATCGCGC CGAGTTATGA TTACTTTATC TTCTATCAAA CACTTGTTCT GACACCCATG CTTTTTCTGA GCGGTGTCGT CTTTCCGGTC GCCCATCTTC CAGGTGCATT TCGACAGCTT GCGCGATTCT TGCCGCTCAC ACATTCCGTT GAACTCATCC GCCCTGCGAT GCTTGCGCGC CCAGCCGCCG GAATCGGCCT GCATGTGATT GCGCTTTTCG TCTACACAGT CTTGCCATTC TTTCTGTCAA CAGTACTGTT TCGCCGACGT CTCCTATCTT GA
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Protein sequence | MMREVFVMAM PTNTWNWRMV WRRNYLAWRK TALVSLIGNL ADPMMYLFGL GFGVGIMIGR IEGTSYVAFL AAGMVATSAM TSATFETIYA TFARMHIQRM WEAVLCTQLT IGDVVLGELA WAATKALLAG TAVTVVATTL GYAAFPGILY VIPVVILTGL AFASIAMVLI AIAPSYDYFI FYQTLVLTPM LFLSGVVFPV AHLPGAFRQL ARFLPLTHSV ELIRPAMLAR PAAGIGLHVI ALFVYTVLPF FLSTVLFRRR LLS
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