Gene Bphy_7526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_7526 
Symbol 
ID6249110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010627 
Strand
Start bp299202 
End bp300239 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content62% 
IMG OID642599106 
ProductP-type DNA transfer ATPase VirB11 
Protein accessionYP_001863512 
Protein GI186474541 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID[TIGR02788] P-type DNA transfer ATPase VirB11 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0812069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAG TGGTTATCGA TGTCATCGAA AAGGGCACCA TCGCGCGCAG CTTCCTCCGG 
CAGATGGGTA TCGCCAGTTT CTTTGACGGC AGTCTCACCG AGGTGGCCAT TAACCGGCCC
GGCGAAATAT GGACACAGGG ATCAGCCGGA TGGAAGCGGC ACGAGGCGCC CGCCTGCACA
CTCGACGCCT GCTTCAAGCT CGCCAACGCC CTCACGGTGA TGAAGGGTGG CAAGTTCTCG
ACGAAGGAAC CGATTCACCC AGTGGCCCTT CCCGACGGCC AGCGCGCTCA CGTGCTGATG
CAGCCTGCGT GCGAGCAGGA CACGATTTCG ATCACCATCC GGATTCCATC GAACCAGCGG
TTTTCCGTTG ACGAATACGA ACGCAACGGC TGGTTTGCAG GCTACCGGGA CATGTCGCCG
CGCCGGGAGG CGCCGGCATC GCTCGACCTG CAGCCGTTCG AGCAGGACAT GCTTCAGGCG
CAGCGCCAGC GCAACGTCAC GCGCCTGCTT GAGCTCGCCG TCGCGAACCG CCTCAATATT
GTGCTCGCCG GCGGCACCGG CTCCGGCAAG ACGACCCTCA ACAAGGCCCT GTCCGATCTC
GTGCCGTCTG ATGAGCGGAT TGGCACGATC GAGGATACGC CGGAGCTGTC GCTGCCGAAC
CATCCGAACC GCGTGCACAT GTTTTTCAGC GACACGCTGC CCGCAAAGGA ACTGGTGCGC
TCGACGCTGC GCATGAAGTT CGATCGTGTG TTTCTTGCCG AGCTGCGTGG CGACGAGACA
TGGGACTACA TGACGCTGCT CAACACGGGT ACGCCCGGCG GTATTACGAC CGTTCACTGC
AACGACGCCA GGTCGGCCCA TTCCCGTATC GCGACGCTGA TCAAGCAGAG CGTGGTGGGT
CAGACGCTCG ACTGGCGATT CATCATGGAT CAGGTCCGCG TGACCATCGA TCTCGTGCTC
TTCATGCGCG ACAAGCGCCT GTCGGAAATC TGGTACGACC CGGTGGGCAA ATGGCAACTG
CTGGGAGGCA TCGCATGA
 
Protein sequence
MNAVVIDVIE KGTIARSFLR QMGIASFFDG SLTEVAINRP GEIWTQGSAG WKRHEAPACT 
LDACFKLANA LTVMKGGKFS TKEPIHPVAL PDGQRAHVLM QPACEQDTIS ITIRIPSNQR
FSVDEYERNG WFAGYRDMSP RREAPASLDL QPFEQDMLQA QRQRNVTRLL ELAVANRLNI
VLAGGTGSGK TTLNKALSDL VPSDERIGTI EDTPELSLPN HPNRVHMFFS DTLPAKELVR
STLRMKFDRV FLAELRGDET WDYMTLLNTG TPGGITTVHC NDARSAHSRI ATLIKQSVVG
QTLDWRFIMD QVRVTIDLVL FMRDKRLSEI WYDPVGKWQL LGGIA