Gene Bphy_7278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_7278 
Symbol 
ID6248877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010627 
Strand
Start bp33535 
End bp34536 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID642598914 
Productzinc finger, SWIM-type 
Protein accessionYP_001863320 
Protein GI186474349 
COG category[S] Function unknown 
COG ID[COG4279] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0502304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGCT ACGGTGGATG GAAACCTTAC GTCCCGGTGG CCGAGCGGCG AAAAAAAGCG 
GAGCAGCTGG TCGCCAGAGC GACCAGGGCT GGCAAGACCC TGTCACCCAT TGCACCGTAT
CGCGGGGCCA TTGCGAAGAC TTTCTGGGGC AAAGCGTGGT GCGATAATCT GGAGCAGTAC
AGCGACTACG ATAGCCGCCT GCCAAGGGGG CGCACCTACG TGCGTAATGG TTCGGTGATC
GATCTGCGGA TTACAAAGGG CAAGATCCAT GCGCAGGTGA TGGGTTCAAG CCTGTATGAG
ATCGCAATTG ATGTCGCCGC CTGTCCAGCA AAGCAGTGGC GCGCGTTGCG CGCCGATTGT
GCGTCGTCGA TTGACTCCAT GGTCGAATTG CTGCTGGGTA AGCTATCGGC TGCGGTGATG
GGCCGCATCT GCCAGCCCGG CACCGGGCTT TTCCCCGCGC CGAAAGATAT CAAATTCGGT
TGCAACTGCC TGGATTGGGC GGTGATGTGC AAGCACGTCG CAGCAGTACT CTACGGCATC
GGCGCACGGC TCGACCAGCA GCCCGAATTG CTCTTTACGT TACGTGGCGT TGACCCCACC
GATCTCGTCA ATCACACAGG TGCGAATTTG TCCGGTGCGG GAAAAGCCAT CCCGGCGTCC
GGCAAGCTGC TCGATAATAC GGCTCTGGGC GATGTGTTCG GTATCGACAT TGACACGGGA
CCCTTTGCAG ATGCCGACAC GGTCCGAGGC AACCGCACGC GCAAACCATC CACTTCGCAA
GCGAGAAAGT CTGCCTTGAC CACGCCGAAG CCGTCCGTGA CCGCGAAATC GGCACCGAAA
GGCAAGGTCG CGACGCCGAC CGCGAGGTCC AGCCCCGCCG CCATGAAAAA GCCCAAGGGC
ACCACCGATC CCGGCACGTC AAAGACGAAC CGTCCGGTCG CGTCTCAAAA GCTCGTTGCG
CGTCCGCGTA CGACGTCGAA ATCCGCGAAA CGCCGCGGGT GA
 
Protein sequence
MASYGGWKPY VPVAERRKKA EQLVARATRA GKTLSPIAPY RGAIAKTFWG KAWCDNLEQY 
SDYDSRLPRG RTYVRNGSVI DLRITKGKIH AQVMGSSLYE IAIDVAACPA KQWRALRADC
ASSIDSMVEL LLGKLSAAVM GRICQPGTGL FPAPKDIKFG CNCLDWAVMC KHVAAVLYGI
GARLDQQPEL LFTLRGVDPT DLVNHTGANL SGAGKAIPAS GKLLDNTALG DVFGIDIDTG
PFADADTVRG NRTRKPSTSQ ARKSALTTPK PSVTAKSAPK GKVATPTARS SPAAMKKPKG
TTDPGTSKTN RPVASQKLVA RPRTTSKSAK RRG