| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7254 |
|---|
| Symbol | |
|---|
| ID | 6248853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010627 |
|---|
| Strand | - |
|---|
| Start bp | 6207 |
|---|
| End bp | 8516 |
|---|
| Gene Length | 2310 bp |
|---|
| Protein Length | 769 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642598892 |
|---|
| Product | SUA5/yciO/yrdC domain-containing protein |
|---|
| Protein accession | YP_001863298 |
|---|
| Protein GI | 186474327 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0068] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.293278 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAGC GTAAGCGCGT TGAGGTCAGC GGCATCGTGC AAGGCGTCGG ATTCCGTTCG
TTCGTCAGGC GGCTGGCGCG ACACTTCAAC CTGAGCGTCG AGGTCTGCAA GGGAACGAAT
GGCGTGCCGA TCGACATACG GGGTGAAGGG CGCAATCTGG ACGCTTTCCG CGCCGCGTTG
GCGGAACAAC CACCGCTGCT CGCCCACATC GACGCGGCGC GCCGGACTGC AGGCACTCCC
AGTCCGGCAA TGAGGTACTT TTGCATCGCG GAAAGCACCG AAGCTGTGAC GTCTCAAAGC
TGTATTCCTG CCTATTCCGC CCTCCGCGAT ATGTGTATCG ACGAGCTTTT CACTGAAGGC
GGCCGGCGCT GGCGACACCC CTTCATCTGC TGTACCGACT GCGGTCCGCG CGATGCGCTG
ATACACCGCA CGCCATACCA CCGTGCGCAT ACCAGCATGA CCGCCTTTGC GTTGTGCGAG
CGCTGCGCGG CAGAATATAG CGATCTCGCT GACCGGCGCT TTCATGCGGA AACGATGGCC
TGCACGGAAT GCGGGCCCAC GCTGCGCTTC AGACCGCCAA GTGCGCGGGG TTATGCGGCC
CCCCGCAGCG GTTCGCCCAT GGATCCGGTC GCGCGGGCAT GGGCCACCAT CGCGCGCGGC
GAAATCGTTG CCGTCAAGAG GCTTGACGGC TTCCAGTTGA TATGCCATGC GACGAATCCA
GCCGCTGTGG AGCGGCTGCG CGAGCGCAAG CGTCGGCCGA CCAAACCGCT TGCGCTGCTG
GTGCCGAAGG TGGCGTCGGC CGCACAATGG GTGGACTTGG GCGATGCGTC GAATGCGAAA
CTGCTCGCTT CGGCGATCCG CCCGATCGTC GTCTCGCGAC GCTTGAACCG GCTCGGACCG
ATGCTGCCCA GCACGCCGAT CCAGTACCTG TTGTTTCATC GGGCGCAGGG CCTGCCGTCC
GGCACCCGCT GGCTCGGCGA AGCCCAGCCG ACGATACGCG TTCCTGCCAG CGCGAACCTG
TCCGGCGAAC CATTGCTGAG CGATTCCGCT GATGTGGGCG AGGCGCTCGC CGACATCGCC
AATGCGGTGC TCGATCACGA TCGTGAAATC GTTTCCCGTT GCGACGACAG CGTGGTGCTC
GCCGCGCATC CGTTGCCTGC GATAACCCTG CGCCGCGCGT GCCGTTCTGT GCCCAAACCC
GTGCCGCTGC CAACGGACGG CCCGTCGGTG CTCGCGCTTG GCGCGCAGAT GAAAAGCACC
GTAACGCTGA CCGGCGGACG ACTCGCGGAC GTGTTGCCAT ATCTCGGCGA CCTTCGTAGC
CTTGGCGTCT GCGAGTTGCT CGAAGAAACC GTCAAGCACC ATGTCTTTCG CATGCACGTC
ACACCGGCCG CCATCGCCTG TGATCTTCAG CCCGATCTCT ATTCGACCCG CCTCGCCGAA
ACATTGGTCG ATTGCTGGAG CGTCCCGTTG CTAGGCATCC AGCACCATCA TGCACATGTT
GCCGCAGTAC TCGCCGAGAA CGCCCACACC GGTCCCGCGT TGGGTCTGGC GCTAGACGGT
TTCGGCTGGG GCGACGACGG GAACGCATGG GGAGGAGAAC TCCTGCGTGT CGAAAGCGGC
GGCCGTGCGC AACGGCTCGG CCATCTGAGC CGACTGCCAT TGCCCGGCGC GGACGCCGCC
GACCACGCAT CTTGGCGCAT GGCGGCCGCG CTACTGCACA CGCTTAAACC CGAGGCGCGC
CGGCTCTCGC CCGCAACGGA CTCACCAACG ACCGTACGAC TCTACCTGCA GATCGAACGC
GGCTTCAACT GCCCGACCAG GACATGCCTT GGCCGCTGGT TTGACGCCAT CGCCGGACTG
GCCGGCATCT GCCCGACGCT ACACCATGAA GGCGAAGCGG CGATGACGCT CGAAGCGCTC
TGGTGTACAG CAACTTCGCG TGCGGACGGC TGGCACATCG ACGGCCCGAA TCTCAACCTG
CTGCCGCTGG CACGCCGGCT CGCCGCCCTG CGCGATCCCG TCGAAATTGC CCGTAGCTGG
CACGCAACGC TCGCAACAGC ACTTGCCGAC TGGCTGCGCC ACGCGATGTG CACCACCGAC
ATCGATACCG ATCGCCGTCC GTGGTGGCTG CCGCGCGAAT CTCGCGCCGA TGTCCGGCTT
GCGAGATGCC CTGCGCAACG TGCGCTGCAC GCTGTGCGGG CCCATAGTTT GCCGCCGGGC
GACGATGCAC TCAGCTACGG CCAGGCGTGG ACCGCAATCC AGCAATTACA GTCCTCTACT
GTCCTGACAC TGGAGGACCG TCTGGAATGA
|
|---|
| Protein sequence | MIERKRVEVS GIVQGVGFRS FVRRLARHFN LSVEVCKGTN GVPIDIRGEG RNLDAFRAAL
AEQPPLLAHI DAARRTAGTP SPAMRYFCIA ESTEAVTSQS CIPAYSALRD MCIDELFTEG
GRRWRHPFIC CTDCGPRDAL IHRTPYHRAH TSMTAFALCE RCAAEYSDLA DRRFHAETMA
CTECGPTLRF RPPSARGYAA PRSGSPMDPV ARAWATIARG EIVAVKRLDG FQLICHATNP
AAVERLRERK RRPTKPLALL VPKVASAAQW VDLGDASNAK LLASAIRPIV VSRRLNRLGP
MLPSTPIQYL LFHRAQGLPS GTRWLGEAQP TIRVPASANL SGEPLLSDSA DVGEALADIA
NAVLDHDREI VSRCDDSVVL AAHPLPAITL RRACRSVPKP VPLPTDGPSV LALGAQMKST
VTLTGGRLAD VLPYLGDLRS LGVCELLEET VKHHVFRMHV TPAAIACDLQ PDLYSTRLAE
TLVDCWSVPL LGIQHHHAHV AAVLAENAHT GPALGLALDG FGWGDDGNAW GGELLRVESG
GRAQRLGHLS RLPLPGADAA DHASWRMAAA LLHTLKPEAR RLSPATDSPT TVRLYLQIER
GFNCPTRTCL GRWFDAIAGL AGICPTLHHE GEAAMTLEAL WCTATSRADG WHIDGPNLNL
LPLARRLAAL RDPVEIARSW HATLATALAD WLRHAMCTTD IDTDRRPWWL PRESRADVRL
ARCPAQRALH AVRAHSLPPG DDALSYGQAW TAIQQLQSST VLTLEDRLE
|
|---|
| |