| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7189 |
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| Symbol | |
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| ID | 6248827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 1840429 |
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| End bp | 1842417 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642598833 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001863235 |
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| Protein GI | 186471917 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000334896 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.517977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGAAG CACAGACCAT CGGATCGCTG ACAGGCCGGG ACAGCGGCTG GCTCACTCCG
TCGATCCAGA AAGCGCACGA GCGGTCGGAA ACGTTCGGAC TCAGTGCGTC GATGTGCCCC
GACTACGACG TGCTCACACA CGGCGAACTG CGGATGAAGC TCGAACAGAA CCGCGTGCTG
TGCACTCACG CGACGCCTGT GATGGAAACG CTGCGCGAGC AGATCGCGAA CACGCAAAGC
ATGATCGTGC TGACCGATGC CGAAGGTCTC ATTCTTCATT CGATCGGCGA CGACGATTTC
CTGCGCCGCG CCGAGAAGGT TGCGCTCAAG GCGGGCGCCA ACTGGGCCGA AGAGCGGCAA
GGCACGAATG CGATCGGCAC CGCGATCGCG GAGCGTACCG CAACCGTCGT ACATGGCGAT
CAGCACTACC TCGCCGCCAA TCGCTTCCTC ACCTGTTCCA GCGTGCCGAT TCTCGATCCG
TATGGCGATC TGGTCGGCGT GCTCGACGTG ACGGGCGACC ACCGCAGCTA CCATCAGCAC
ACGATGGCGC TCGCGAAGAT GTCCGTGCAG ATGATCGAAA ACCATCTGTT CACCAACACC
TTCCGCAACA CGCTGCAAAT CGCGTTTCAT GGCCGGCCGG AGTTTCTCGG CACGTTGATG
GAAGGCATCA TGGCCTTCAC GTGCGACGGC CGCTTTCTGT CCGCGAATCG CAGCGCACAG
TTCCAGGTCG GGCTGCCGCT CGCCGCGATG CGTGCACACA CGCTCTCGTC GCTGTTCGGG
CTGACCACGC CGCAACTGAT CGACCGGCTG CGTTCGAGCG GGGGTCATCA CATCACGCTC
GATCTGAACA ATGGCACGGT CGTTTGCGCA AGCGTCGAGT TTCGCCGGAC GACGCTTGCC
AGCGAAGGCT CGTGGCCTGG CGCGGCGGCC GTCAGCACGC GCCCGGCCGC CGCGCGCACC
CAGCCGGCGA AGATGCCCGC TTCCGCCAAT GTGCCATCGC GGCTCGACTG TCTCGACACA
GGCGATCCGC AGATTTCCGC CGTCATCGCC AAGGTGCGCA AGGTGATCGG CAAGGACATT
CCGATCCTGA TCACGGGTGA AACGGGCACC GGCAAGGAAC TGCTCGCGCA GGCCATCCAC
CACGATTCGC CGCGCCGCGC AGGGCCGTTC ATCGCTGTCA ATTGCGCGTC GATACCGGAA
AATCTGATCG AGTCGGAACT GTTCGGCTAT GAAGAAGGCG CTTTCACGGG CGCGCGCCGC
AAAGGCGCGG TCGGCAAGCT GCTGCAAGCG AACGGCGGCA CGCTGTTTCT CGACGAGATC
GGCGACATGC CGTATCCACT GCAGGTGCGT CTGCTGCGCG TACTGCAGGA ACGTGTCGTC
GATCCGCTCG GCTCCAGCAA ATCCGTTCCC GTCGATATCG CCGTCGTTTG CGCGACGCAC
CGCAATTTAC GCGAGATGAT CGCCCAGAAC CGGTTCCGCG AGGATCTGTA TTACCGATTG
AACGGTCTCG TCGTCAAACT GCCGCCGTTG CGCGAACGTA CCGATCTCGC CGCCGTCATC
GAGCGGATGC TGCAACTGGT ACCGTGCGAC CAAATGGAAG GTGCGCCGCC GCTCAGCGTC
GCCGACGACG TGATGGCGCT GTTCCAGCAG TGCGCGTGGC CCGGCAACTT CCGGCAACTC
TGCAATCTGC TGCGCACGGC CGCCGCGATG ATCGACGACG ACGGCGAAAT CAGGCGCGAG
CATCTGCCCG ACGACTTTTT CGACGATTTG CATAGCGCTG CGCCCCGCGC CGCTCCATCG
GCGGATGCGC CGTTGCCGCT GCAGGGCGGG CGGCTGCAGG ACGTGCAGGC GTCCGCGATT
GCGGCGGCAG TCGCGCGGCA CAACGGCAAT GTGTCGGCGG CCGCGCGGGC GCTGGGCGTC
TCGCGCAACA CGGTGTATCG CAAGATGCCG TCGCTGTGCG CGGGCGCGGA ATCGCGCGGC
AACGACTAG
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| Protein sequence | MREAQTIGSL TGRDSGWLTP SIQKAHERSE TFGLSASMCP DYDVLTHGEL RMKLEQNRVL
CTHATPVMET LREQIANTQS MIVLTDAEGL ILHSIGDDDF LRRAEKVALK AGANWAEERQ
GTNAIGTAIA ERTATVVHGD QHYLAANRFL TCSSVPILDP YGDLVGVLDV TGDHRSYHQH
TMALAKMSVQ MIENHLFTNT FRNTLQIAFH GRPEFLGTLM EGIMAFTCDG RFLSANRSAQ
FQVGLPLAAM RAHTLSSLFG LTTPQLIDRL RSSGGHHITL DLNNGTVVCA SVEFRRTTLA
SEGSWPGAAA VSTRPAAART QPAKMPASAN VPSRLDCLDT GDPQISAVIA KVRKVIGKDI
PILITGETGT GKELLAQAIH HDSPRRAGPF IAVNCASIPE NLIESELFGY EEGAFTGARR
KGAVGKLLQA NGGTLFLDEI GDMPYPLQVR LLRVLQERVV DPLGSSKSVP VDIAVVCATH
RNLREMIAQN RFREDLYYRL NGLVVKLPPL RERTDLAAVI ERMLQLVPCD QMEGAPPLSV
ADDVMALFQQ CAWPGNFRQL CNLLRTAAAM IDDDGEIRRE HLPDDFFDDL HSAAPRAAPS
ADAPLPLQGG RLQDVQASAI AAAVARHNGN VSAAARALGV SRNTVYRKMP SLCAGAESRG
ND
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