Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_7110 |
Symbol | |
ID | 6248621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 1771437 |
End bp | 1773521 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642598756 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001863158 |
Protein GI | 186471840 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0633557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACAGG GCAGCTACAA CAGTCTCCTC GTGCTGTTCT CGCTCCTTGT CGCGGTGCTG GCTGCGTACA CGTCGCTCGA AATGGCAGGC CGCATCACGA CGGCGACCGG CCGGACCGCG CGCCTGTGGC TGACGGGCGG CGCGTTCGCG ATGGGACTGG GTATCTGGTC GATGCACTTC ATCGGCATGC TCGCCTTCAG CCTGCCGATC CGGCTCGGCT ACGATCCCCT CGTCACGCTG CTGTCGCTGT CGATCGCCGT CGCGTCGTCG GCGTTCGCGC TCTGGCTCGT GTGTCAGCAG ACGCTGCCCG CCGGACGGCT CGTGGGCGGC GCGGTGCTGA TGGGTCTGGG CGTCGCGGGC ATGCACTACA CGGGCATGGC GGCGCTGCGC ATGGAGCCCG GCATCGTCTA CGACGTGCCG CTGTTCGCGC TGTCGATCGT CATTGCCGTC GCCGCTTCCG GTGTCGCGTT GAAGACGGCG TTCAGCCTGC GTCACAACTC GCGCCGCATG CGGCCGCTGC GGGCGGGCGC CGCGATCGTG ATGGGTCTCG CGATCGTCGG CATGCACTAC ACAGGTATGT CCGCCGCGGG ATTTCCGGCG GGAAGCCTGT GCACGGCAGC GACGGAAGGT GTGAACGGCA CATGGCTCGC TCTTCTCATC ATTGTCGTGA CGCTGGCGGT GACGGCCGTC GCGCTGACTA TTTCGCTGCT CGAAGATCTG CGCCTCGAAA CGGAGAACGC GGCGCTCACC CGTTCGCTCG CGGAGGCGAA CCAGGAACTC GGCTATCTGG CTTTGCACGA CGCGTTGACC AAGCTGCCGA ACCGCGTCTT GCTGGAGGGC CGGCTCGAAG AAGCCCTGGC CCGCGCGCGC TCGGACGGCG GCGAATTCGC GCTGATGTTC ATGGATCTCG ACGGCTTCAA GGTAGTCAAC GACGCCTACG GCCATCAGGT CGGCGACCGA CTGCTGGTGC AGGTAGCCGA ACGGCTCGCA TCGGCCGTGC GCGGAAACGA CACGCTGGCG CGCGTCGGCG GCGACGAGTT CGTGCTGCTC GTTCCCGACG AGGGCCGCGC GGGGGCGACG ATCATTGCGG GTCGGTTGCT CGCGGCCATC GGCGCGCCGT TCGATGTGGA CGGCCACGAC TTGCGGATTT CAACCAGCAT CGGCATCGCG ATGTGTCCAG CCGACGGCGC GCTGGTGCAC GACGCGCTGA TGCACGCCGA CGCCGCGATG TATCACGCGA AGTCGATGGG CCGCAACGCG CATTGCTTCT TCGACGCGTC GATGAACGAG AACATGCAGT GCCAGCTGCA ACTCACGCAG GATCTGCGCG CGGCCCTCGA GCGCAACGAA CTGGTGTTGC ACTATCAGCC GCAATTCGCC GCGCCGGACG GACCGATCAC GGGCGTCGAG GCGCTGGTGC GCTGGGCGCA TCCGAAGCGG GGCATGATCG GCCCCGACGA ATTTATTCCG CTCGCCGAAA AAACCGGGCT GATCGTGCCG ATCGGCGAAT GGGTGCTCGA CGAAGCGTGC CGTCAGGTCC GCGAATGGCT CGATACGGGC GCGTGCGACT GGAACGTCGC CGTCAACCTG TCGCCTGTGC AGTTCAGCCA CCCGCAACTG ACGGCGCTGG TGCGCGACAC GCTCGCGCGG CATCGCGTCG ATCCGCGTCA CCTGACGATC GAGGTGACCG AGTCGGCCGC AATGCGCGAC GTCGAGGCAA GTCTGCGCAT TTTGCAAGCG CTGCACGAGA TGGGCGTGCG CATCTCCATC GACGATTTCG GCACCGGCTA CTCGAGCCTG ATGTACCTGA AGCGGCTGCC CGCGAGCGAA CTCAAGATCG ACCGCGGCTT CGTGCGCGAG CTGGCGCACG ACGCGGAGGA TGCCGCTATC GTGTCGTCCG TCGTCGCGCT GGGGCATACG CTCGGGATCG ATATCGTGGC GGAAGGCGTC GAGACCGCGA CGCAGAAGGA GTTTCTGACG CGGCTTGGCT GCAATTCGCT GCAAGGCTAC CTGCTCGGAC GACCGGTTCC GGCCGCGGAC CTGGGCGCGC TGTCGCGGGA GCCTGCGCGG GCGAGCGTGT CGTGA
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Protein sequence | MLQGSYNSLL VLFSLLVAVL AAYTSLEMAG RITTATGRTA RLWLTGGAFA MGLGIWSMHF IGMLAFSLPI RLGYDPLVTL LSLSIAVASS AFALWLVCQQ TLPAGRLVGG AVLMGLGVAG MHYTGMAALR MEPGIVYDVP LFALSIVIAV AASGVALKTA FSLRHNSRRM RPLRAGAAIV MGLAIVGMHY TGMSAAGFPA GSLCTAATEG VNGTWLALLI IVVTLAVTAV ALTISLLEDL RLETENAALT RSLAEANQEL GYLALHDALT KLPNRVLLEG RLEEALARAR SDGGEFALMF MDLDGFKVVN DAYGHQVGDR LLVQVAERLA SAVRGNDTLA RVGGDEFVLL VPDEGRAGAT IIAGRLLAAI GAPFDVDGHD LRISTSIGIA MCPADGALVH DALMHADAAM YHAKSMGRNA HCFFDASMNE NMQCQLQLTQ DLRAALERNE LVLHYQPQFA APDGPITGVE ALVRWAHPKR GMIGPDEFIP LAEKTGLIVP IGEWVLDEAC RQVREWLDTG ACDWNVAVNL SPVQFSHPQL TALVRDTLAR HRVDPRHLTI EVTESAAMRD VEASLRILQA LHEMGVRISI DDFGTGYSSL MYLKRLPASE LKIDRGFVRE LAHDAEDAAI VSSVVALGHT LGIDIVAEGV ETATQKEFLT RLGCNSLQGY LLGRPVPAAD LGALSREPAR ASVS
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