| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7062 |
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| Symbol | |
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| ID | 6248575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1726016 |
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| End bp | 1727797 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642598710 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001863112 |
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| Protein GI | 186471794 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I
[COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.156031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG CTCTTCATGC GTTGCGTGAA AACGAAGCGT CGCGGCGCGG CCGGTCTGTC
ATGCTCGCGC GCTGCATGCG CTTTCTGCCG ATCGTACCGA CATTGCTGTT TCTGCTGCTG
TTTTTCATCG TGCCCGTCGG CGAGATACTG CAAGGCGGTC TCGTCAGCGC CGACGGTCAG
ATCGGGTTCG CGCAGTTCGA ACGTATCGCG CGCACACCTG TTTATGCGAA GGTGCTGTGG
ATCACCTTCG CCATCTCGTT CCTGACCGCG GCGCTGTCCA TCCTGCTCGG TTATCCCATC
GCATACATGC TGAGCCGGCT GTCGGAGCGC GTGCGCGAAC GCTGGCTGCT GTGGATCATG
CTGCCGTTCT GGACCAGCTA TCTCGTCAAG ACATACGCGT GGATGCTGTT GCTCTCCAAG
ACTGGCGTGC TCTCGACGAT CGCGCTCTCG CTCGGTCTCG TGCACGAGAC GAGCGGTACG
ATACCGTCGC TGACGGGCGT GCTGATCGGC ATGGTGCATT CGATGCTGCC GCTCGCCGTC
ATGACGATGC TTCCCGTGAT GCGCGGCATC GACGACCGGC TCGCGCAGGC GGCCGAGACG
CTCGGCGCGG AACGTAGCAC GAGCTTCTTC ACGGTCTTTC TGCCACTCTC TTCGCCGGGC
GTGGCGGCGG CGGGGCTGCT CGTATTCATC TCGAGCCTCG GCTTCTTCAT CGTGCCGGCG
CTGCTCGGCT CGCCGAAGGA AACCATGATC GCGCAGCTCG TGATCTCGTC CGTCCTCGAA
CTTTTCGATA TGCGGTTCGC CGGCGCGCTG TCCACTGTCT TGCTGGTCTG CTCGATTGTC
ATCTTCTTCG TCTATGACCG CATGGTCGGC CTCACCTCGC TGACGGGTGA AGTGACGCAG
CGGTCGCGCG GCTCGCGCTC GCGGGGCTTC CGGCTCGCAC TGCTGATGAC GGCGGGCCGC
GTCTGCGCGC CATTCATGAT GCGCCGCAAC GCGCTCGCAG ACACGGCGGC TCGAGCCGCG
AGCCCGCTCG GAATCTATAC GTGCGTCATC ATGGCGCTGC TCGTGGTGCC GGTGTTGTCG
GTGATTCCAT ATGCGTTCAC GTCGAGCGAC TACATCGCGT TTCCGCCGAA GTTCTTCAGC
GCGCGCTGGT TCGGCATCTT CATGGATTCG CCCGTATGGC GTAGCGCGAT CATCCGCTCG
TTCGAAGTCG GTCTCGGCAC GGCGCTGCTG TCGCTGCTGC TCGGCTTCGG CGCGACGCTC
GCGATGACGC GCATGCCGCG CCGTGCGAGC AAGCCTGTGT TCGCGCTGCT GGTTGCACCG
TTGATCGTGC CGCGCATCGT TTTCGCAGTG GGTCTGCTGT ATCTGTTCGG CCGCCTGGGA
CTCACGGGCA CGAATCTCGG CCTCATCGTC GGACATACGG TGCTGGCGAT TCCTTATGTG
GTCGTCACGC TCGCGGCAGG TTTCCAGCGC TTCGACTGGC GTCTGGATGA CGCAGCCCGA
GTGATGGGCG CGTCTGCGGT GCGGCGCATT ACGTCGGTCG TGCTGCCGCT GCTCATGGCA
AGCGTCATGG CGGCGTTCCT GTTCGCGTTT CTCGTTTCCT TCGACGATCT GACGATTGCG
ATCTTCGTGA GTGGCGGCAT CAATTCGACG CTGCCGAAGC AGATGTGGGA CGACATCCAG
CTCGCGATCA CGCCGACCCT CGCCGCCGTG TCGACTACGC TGGTCATTCT GATCGCGCTC
GTCGTGGCGG TGTCTTCCTG GCTCAAGCGC CGCGCTCGCT GA
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| Protein sequence | MTIALHALRE NEASRRGRSV MLARCMRFLP IVPTLLFLLL FFIVPVGEIL QGGLVSADGQ
IGFAQFERIA RTPVYAKVLW ITFAISFLTA ALSILLGYPI AYMLSRLSER VRERWLLWIM
LPFWTSYLVK TYAWMLLLSK TGVLSTIALS LGLVHETSGT IPSLTGVLIG MVHSMLPLAV
MTMLPVMRGI DDRLAQAAET LGAERSTSFF TVFLPLSSPG VAAAGLLVFI SSLGFFIVPA
LLGSPKETMI AQLVISSVLE LFDMRFAGAL STVLLVCSIV IFFVYDRMVG LTSLTGEVTQ
RSRGSRSRGF RLALLMTAGR VCAPFMMRRN ALADTAARAA SPLGIYTCVI MALLVVPVLS
VIPYAFTSSD YIAFPPKFFS ARWFGIFMDS PVWRSAIIRS FEVGLGTALL SLLLGFGATL
AMTRMPRRAS KPVFALLVAP LIVPRIVFAV GLLYLFGRLG LTGTNLGLIV GHTVLAIPYV
VVTLAAGFQR FDWRLDDAAR VMGASAVRRI TSVVLPLLMA SVMAAFLFAF LVSFDDLTIA
IFVSGGINST LPKQMWDDIQ LAITPTLAAV STTLVILIAL VVAVSSWLKR RAR
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