| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7011 |
|---|
| Symbol | |
|---|
| ID | 6248526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1669596 |
|---|
| End bp | 1670732 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642598661 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001863063 |
|---|
| Protein GI | 186471745 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0792174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.559457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCA TCCTCAGGCT CGCGTTCAAG CTGCTGGTCA ACGATAGCGC CAAGTTCACC
GCGCTGATTG TCGGCATCAC GTTCGCAGTG TTCCTGATGA TCGAAATGAC ATCGCTCTTC
GCGGGGATCC TGAACAAGTC TTCGTCTACC GTGATCAACG TTGGCGCCAA AATGTGGGTG
ATGGATCCTG CCGTGCAGAC GATCGCGAGC AGCATCGGCA TGCCCGACTA CGTGCTCGAC
GCCGTACGCA GCATCGACGG TGTGGACTAT GCCGTGCCGC TCTATTCAGG TATCGCGCTG
GTGCGTCTGC GTGACGGCGC GTATCAGGCC GTCACGGTGA TTGGTCTGGA CGATGCGAGC
CTGTTCGGCT GGCCCAAGAT GAAAGCAGGC CGCATCGAAG ACATCTACGC GGAGAACGGT
TTCATTGCCA TCGACGACGC GGAATTCGTC AAGCTGCATA ACCCCAGGCT TGGCACCGAC
TTCGAACTCA ACGACCATCG CGGCGTCGTG GTCGGCATCG CGACCGTGAC CAGCAGCGGC
CTGTTCGGCA CGCCGACGCT CTACACAACG TACAAGCGGG CAGTCCAATA CATTCCATCG
ACGCGCTACA CGACGTCCTA TATTCTCGTC GAACCCAAAT CGGCCGCGGA CATTGCACAT
ATCAAGCAGG TTGTCGCGTC GCTCGGATAC GTTGCCTACA CGAAGAAAGA GTTCATGCAG
CGCATCGCGC ACTTCTACAA ATACGAAACC GGGCTGGGCA CAAACATTCT CTTGATGACG
GCGATCAGCT TCATTGTGGG GCTGTCCATC TCCGGTCAGA CCTTCTACAC GTTCATCCTC
GAAAACCTGG AAAAGTTCGG CGCACTGAAG GCGATCGGCG CCAAACGCCA CGAGCTGGTC
GCGATGATCC TGTTTCAGGC AACGTTTACT GCGTTGACGG GCTACGGACT CGGCGTGGGG
CTGTGCGCGG CGTCGATCAG TCTCGTCCGT CTGCGCGTGC CGGACTACGC GGCAATGATC
ACCTTTGGCA ATCTCGTGCT CGCGTTTGCG ATGGTCGTAG TGATCGCCGC CTCGTCGAGC
TACCTGGGTG TGCGCCGGGT GCTGCGCATC GAGCCATTCG ATATATTCCG GGGCTAG
|
|---|
| Protein sequence | MKGILRLAFK LLVNDSAKFT ALIVGITFAV FLMIEMTSLF AGILNKSSST VINVGAKMWV
MDPAVQTIAS SIGMPDYVLD AVRSIDGVDY AVPLYSGIAL VRLRDGAYQA VTVIGLDDAS
LFGWPKMKAG RIEDIYAENG FIAIDDAEFV KLHNPRLGTD FELNDHRGVV VGIATVTSSG
LFGTPTLYTT YKRAVQYIPS TRYTTSYILV EPKSAADIAH IKQVVASLGY VAYTKKEFMQ
RIAHFYKYET GLGTNILLMT AISFIVGLSI SGQTFYTFIL ENLEKFGALK AIGAKRHELV
AMILFQATFT ALTGYGLGVG LCAASISLVR LRVPDYAAMI TFGNLVLAFA MVVVIAASSS
YLGVRRVLRI EPFDIFRG
|
|---|
| |