Gene Bphy_6988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6988 
Symbol 
ID6248503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1639770 
End bp1640186 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content61% 
IMG OID642598638 
Productcupin 2 domain-containing protein 
Protein accessionYP_001863040 
Protein GI186471722 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.833985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTC GATCCATCGT AAGAGCCGCC TGCACCGGCA TGGCCGTCGG CATCGCGGTG 
CCGGCCGCGG CACATGGCGC GGCTGAAACC GTCACACCGA ACTTTCAGCA CGCCATTCAC
AACATTCCGG GAAAGTCGTT GACCGCCGTC GTCGTTGATT ACGCACCCGG CGCAGCGTCG
TCCGCACACA GGCATGCGGG CTCGGCTTTC ATCTATGCGT ACGTCGTATC CGGCGAGATC
GAGTCACAGG TGGATGATGG TCCGAGGCAC GTCTACCATG CGGGCGAAAG CTTCTTCGAG
AAGCCCGGCG CCGTTCACCG CATAAGCCGC AACGCGAGCG AAACAAGGCC TGCAAAGTTG
CTCGCCGTAT TCGTCGCGGA CAGCAGCGAC AAAGCCCTGA CTACCCCCAT CAAGTAA
 
Protein sequence
MNIRSIVRAA CTGMAVGIAV PAAAHGAAET VTPNFQHAIH NIPGKSLTAV VVDYAPGAAS 
SAHRHAGSAF IYAYVVSGEI ESQVDDGPRH VYHAGESFFE KPGAVHRISR NASETRPAKL
LAVFVADSSD KALTTPIK