| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6957 |
|---|
| Symbol | |
|---|
| ID | 6248473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1607714 |
|---|
| End bp | 1608592 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642598608 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001863010 |
|---|
| Protein GI | 186471692 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02249] integron integrase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAC TGCGCCAACG CATGTTGCAC GACATGCAGA TCAGAAATCT ATCGGATAAC
ACACAGAAGT CCTATCTATT GCAGGTGTCG AGTTTCGCCC GGCACTTCCG CCGCTCGCCC
GAAATGCTGG GTCCGGAGGA GATCCGCGCC TGGCTCATCT ACCTCCGCGA AGAGCGCAAG
CTGGCACCCG CCAGTCTCAG CCCGGCGATC GGCGCGCTGC GCTTCCTCTA CCGCGTGACG
CTCAAACGTG ACTGGAGTGA CGAGGATTTC CCCTTGCCCA GGAAGCCAGT CCGGCTCCCC
GTCGTTCTCA GCCTGGAGGA GATCACCACC TTCTTCGACT CCATCCCCAG CCTGAAGCAT
CGGACCATCC TGATGGTTGC CTACGCAGCC GGCCTGCGTG TCTCGGAAGT CGTCCACCTG
AAGGTCACCG ACATCGACAG CAAGCGCATG GTCATCCGTG TGAACCAGGG CAAGAACCGT
AAAGACCGTT ACGTCATGCT CTCGCCGCGT CTGCTCGAGG TTCTCAGAAC GTACTGGCAA
GACGCCCATC CCCGCGACTG GCTGTTTCCC GGTGATATTC CCGGACACCC CATCACACGA
ACCGCGGTCG CGCGAATCTG CGCTCTCGCA CGCCAGCGCA GCGGCATCAC CAAACCCGTC
ACCCCCCATT CGCTGAGACA CGCATTCGCC ACACATCTGC TGGAAACCGG TACCGATGTG
CGCAGGATCC AGCTGCTCAT GGGCCATCGG TCCCTTGCTA CTACTTCGCG ATACTTACGA
ATCGCGACCA GCACCGTGTG CGCCACCGCG AGTCCCTTCG ATCTGCTGCC GCACCCGGCG
CCCATTCCAT CCCCACCACC TGCACCCGAG TACTTCTGA
|
|---|
| Protein sequence | MTPLRQRMLH DMQIRNLSDN TQKSYLLQVS SFARHFRRSP EMLGPEEIRA WLIYLREERK
LAPASLSPAI GALRFLYRVT LKRDWSDEDF PLPRKPVRLP VVLSLEEITT FFDSIPSLKH
RTILMVAYAA GLRVSEVVHL KVTDIDSKRM VIRVNQGKNR KDRYVMLSPR LLEVLRTYWQ
DAHPRDWLFP GDIPGHPITR TAVARICALA RQRSGITKPV TPHSLRHAFA THLLETGTDV
RRIQLLMGHR SLATTSRYLR IATSTVCATA SPFDLLPHPA PIPSPPPAPE YF
|
|---|
| |