| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6861 |
|---|
| Symbol | |
|---|
| ID | 6248381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1491003 |
|---|
| End bp | 1492055 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642598516 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001862918 |
|---|
| Protein GI | 186471600 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.133867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCG ACACACTTCA TTTCAAAGCG GGCACTTCGG CCAATTCAGC GACATCGCGG
CCATTGCGCT TTGGCATCGT GCTGTTGCCG AACTTCACGC TGACGGCGTT CTCCGGTTTC
GTCGATCTGC TCAGGCTCGC CAGCGACGAA GGCGACATGA GCCGGCCCGT GCGCTGTTCG
TGGACTATCG TTGGCGAATC GCTGGTGCCC GTTAGGGCGA GTTGCGGCAT TCAGGTCGCG
CCGTGGACGA CCTTCGACGA AGCGGGCGAG TTCGATTATG TCGTGGTGGT GGGCGGCCTG
TTGCACTCGG GGCCGTCGGC GAGTCGCGCC ACGCTCCAGT TCATCCAGCA CGCGGCGACG
ACGCCCGCAA CGCTGGTTGG CATCTGCACG GGCGTATTCG CGTTGATGCG CGCCGACGTG
ATGGACGGCT ATCGCATCTG CGTGAGCTGG TTTCACTATT GGGATTTCGT CGAGCGCTTT
CCGGGCGTCG ATGAACGCAA TCTGGTTGCG GACCGGCTGT TCGTGATCGA CCGGCGGCGT
ATTACCTGTT CGGGCGGACG CGCGTCGATC GATGTCGCCG CGGCGATACT GCTGCGCCAT
GTCGAGGCGA CCATCGTGCA GAAGGCGCTG CGCATCATGC TGGTCGACGA CGCACAAAAG
GGTAACGCGC CGCAGCCACA TCCACCGGGA CTCGAACCGG CAACGCATCC GAAGGTGCGC
CGCGCGATCC TGCTGATGGA GCAGCACATC GGCCAGCCGT TGAGCCTCGC CGACCTTGCG
CAGCGGCTGG AGATGTCGGT CAGGCAACTG GAGCGTCTGT TCGCCGCAGA GACGGGCAAG
TCGCCGCATG CGTATGGCCG GCAGATCCGC ATCCGGATGG CGTCGTGGCT GCTGACGAGT
TCGGACCGCA CGGTCGCGGA TATCGCGACG TCTTGCGGCT TTTCCGACGC TTCGCATCTT
GGCCGCGAGT TCAGGAAGGA ATTCGGCGAA TCGCCCGTCG CGTATCGCGT GGCGCGTCCG
CAAAGCCATG CATCGGCATT GGCTGCAGGC TGA
|
|---|
| Protein sequence | MSSDTLHFKA GTSANSATSR PLRFGIVLLP NFTLTAFSGF VDLLRLASDE GDMSRPVRCS
WTIVGESLVP VRASCGIQVA PWTTFDEAGE FDYVVVVGGL LHSGPSASRA TLQFIQHAAT
TPATLVGICT GVFALMRADV MDGYRICVSW FHYWDFVERF PGVDERNLVA DRLFVIDRRR
ITCSGGRASI DVAAAILLRH VEATIVQKAL RIMLVDDAQK GNAPQPHPPG LEPATHPKVR
RAILLMEQHI GQPLSLADLA QRLEMSVRQL ERLFAAETGK SPHAYGRQIR IRMASWLLTS
SDRTVADIAT SCGFSDASHL GREFRKEFGE SPVAYRVARP QSHASALAAG
|
|---|
| |