| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6850 |
|---|
| Symbol | |
|---|
| ID | 6248371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1475387 |
|---|
| End bp | 1476850 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642598506 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001862908 |
|---|
| Protein GI | 186471590 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.473819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACGC CGATGAAGGC AAGTGGCGGC GCAAAGGTGG CCCAGTCCGC GTCGACACCT
ATTATCATGC TCGTCGCAGC GGCCTTCTTC ATGGAGAACC TCGACGGCTC GATCATCGCA
ACAGCGATTC CCCAGATGGC TCAAAGTTTT GGTACGCACG TTGCCGACAT GAGCCTTGGG
ATCACGGCGT ACCTTCTGAC GCTTGCGGTA TTTATTCCCA TCAGCGGCTG GACTGCCGAT
CGCTTCGGCG TTCGGACCGT TTTCACAAGC GCGATTGTTC TTTTCACGGT TGCTTCAATA
CTATGCGGCA TCACAGATAC GTTCGGCGAG TTCGTGGCGG CGCGCGTTTT TCAGGGCATC
GGTGGTGCCA TGATGGTGCC GGTGGGGCGA CTTGCTGTGC TGCGGAGCAC TCCAAAAGCA
GGGCTGATGC GCGCCATCGC CATTGTGACG TGGCCGGGCC TGATAGCGCC GGTGCTAGGT
CCCCCGCTAG GCGGTTTTCT TACAACCTAC TTCTCATGGC GGTGGATCTT CTACCTCAAT
GTTCCATTGG GCGTCGTCGG TGTCTTTGTC TCTATGCGTC TGCTCGATAA CCGGCGAGAG
CAGGATTTAC GTTCGTTTGA TATCGTTGGC TTTATCCTAT GTGGCATTGG TTGCGCAACT
CTACTCTACG CAATGGAGTT AATCGGGAGG GGTGACGTTT CCTTAAACAG GCTCGGACTT
TTCCTCACGA TCAGCATTAG CTGTCTGGGT TGCGCCTGGC TGCACCTTAA GCGCGTAAAG
AACGGAGCTA TTGACCTTTC AACGCTGAAA ATCAGGACTT TCGCCGTCGT CATGGGAGGT
GGTTCGCTAT TCCGTATTTC CATAAGCGCC GTGCCATTTC TTTTGCCTTT GATGTTTCAG
GTGGGTTTCG GAATGGACGC GTTCCGATCG GGTCTTTTGA CGCTTGCAGT ATTTGTCGGC
AATCTGTTAA TGAAAGTTTT CACGACTCGG ATCGTCCGAC GCTTTGGGTT TCGCTCCGTG
CTGCTGGTAA ATGGAGTCAT TGCATCAATG ACATTGGGTA TGACGAGCCT CATATCAGCC
GGGACCCCGA CGGCAATAGT TTTCTTCGTT CTTTTCGTGG GTGGTCTTGC GCGCTCGCTG
CAGTTCACGG CACTAAACAC TCTTAGTTTC GCTGATGTTC CGAAGTCGAA CATGAGCGCT
GCCACGTCGT TTTCGAGCAC CGTTCAGCAA TTGAGTGTTG GGATCGGCGT TGCTGCGGGC
GCGATGTCGC TCCAGCTTTC CCGTTGGATG TCCGGTCACG GGTCCGACGC GATGACTGCG
GGTGATTTCC AAATGGCGTT TCTGTTCGTG GCTGCCATCG GTCTTCTGGG AGTCGTCGAC
GTGCTGGGGC TTCCCCGGGA CGCTGGAGCA GTGGTGAGCG GACATCGAAC GGCCGAAAGC
ACTCTGCGCA GTGGGCGCCC CTAA
|
|---|
| Protein sequence | MQTPMKASGG AKVAQSASTP IIMLVAAAFF MENLDGSIIA TAIPQMAQSF GTHVADMSLG
ITAYLLTLAV FIPISGWTAD RFGVRTVFTS AIVLFTVASI LCGITDTFGE FVAARVFQGI
GGAMMVPVGR LAVLRSTPKA GLMRAIAIVT WPGLIAPVLG PPLGGFLTTY FSWRWIFYLN
VPLGVVGVFV SMRLLDNRRE QDLRSFDIVG FILCGIGCAT LLYAMELIGR GDVSLNRLGL
FLTISISCLG CAWLHLKRVK NGAIDLSTLK IRTFAVVMGG GSLFRISISA VPFLLPLMFQ
VGFGMDAFRS GLLTLAVFVG NLLMKVFTTR IVRRFGFRSV LLVNGVIASM TLGMTSLISA
GTPTAIVFFV LFVGGLARSL QFTALNTLSF ADVPKSNMSA ATSFSSTVQQ LSVGIGVAAG
AMSLQLSRWM SGHGSDAMTA GDFQMAFLFV AAIGLLGVVD VLGLPRDAGA VVSGHRTAES
TLRSGRP
|
|---|
| |